Durio zibethinus (durian): 111285809
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Entry
111285809 CDS
T05242
Name
(RefSeq) uncharacterized protein LOC111285809 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111285809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111285809
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111285809
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111285809
Messenger RNA biogenesis [BR:
dzi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
111285809
DNA repair and recombination proteins [BR:
dzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
111285809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
111285809
NCBI-ProteinID:
XP_022731146
UniProt:
A0A6P5XTG3
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
MGDREEMDFVLKKYFGYSGFRAYQKEVIQKVTEGRDCLVVMATGSGKSLCYQVPPLIVGK
TAIVVSPLISLMQDQVMTLKQRGIRAGYLGSAQTDSTAQTKAENGYFHLLFLTPEKACLL
PASFWLNLLKLGICLFAVDEAHCISEWGHDFRVEYKQLDKLRAILSDVPFVALTATATEN
VRVDIINSLKMKDPYVAIGSFDRKNIFYGVKHHNHSQSFLDELVQEISRLVANAGSTIIY
CLTIKEVERIFKSLQKAGIKAGIYHGQMGSKAREESHRLFIRDELQVMVATIAFGMGIDK
PNVRHVIHYGCPKSIEAYYQESGRCGRDGMASVCWLYYTGSDFAKAEFYCGESQSENHKR
AIRESLMAGQRYCLLTTCRRKFLLDHFGEKLSTDNCGNCDNCLVSRRERDMSKESFLLMA
SIQSCGGNWGLKMPIDVLRGSRSKKIVDAQFDKLPLHGLGKSYSSNWWKALAHQLISHGY
LMETVKDVYRTVSVSPKGKQHLSSAGPDHQSPLYLPLTDEMLDDEDQDSTSGEIRKVKNL
APLDNEGFSEAEAQLYRLLLEERMKLARAIGTAPYAVCGDETVKRIALIRPSTKARFGNI
DGVNQHLVRTHGDYLLNIIRHLSESLNLSLDGEASFQTAIPKAHPVLNNQRKIAPAKYDA
WKMWHADGLSVQKIANFPGRPAPIKEQTVLQYLLDAAQEGFEIDWTRLCSEIELTHQMFS
DICDAVSKIGSREKLKPIKDKLPEETSYTHIRTCLVMQSYGISPEVVAPCCNPQKTAELS
SEAVESCLIDACHTKSPHEFDMSGNSMVHFSSSKNLTSAQGPKLDLDCNDDLVSSKRHKL
VHKGSSTASEATEDLILNWLKNHDEGVPLSAIVEHFHGSNKEHVVKLLGNLESDFMVFRK
KDLYRLM
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagagaagagatggatttcgttctcaagaaatactttggctactctggattc
cgagcgtatcaaaaggaagtgatacagaaagtaacagaaggaagggactgcttggtggtg
atggccactggctctgggaaatctttgtgttatcaggttcctccactgattgtcggaaag
acagcaatagttgtaagtcctctcatctccttaatgcaggatcaggtcatgactttgaaa
cagcggggcatcagagctgggtaccttggcagcgctcagactgattccaccgcccagacc
aaagctgagaatggttattttcacctactcttcttgacccctgagaaggcatgcctcctt
cctgccagcttctggttaaatcttctaaagctgggaatttgtctgtttgctgttgatgaa
gcacactgcatatctgaatggggccatgatttcagggtggaatacaaacagttggacaag
ttacgagctattctctctgatgttccttttgtcgccttaactgcaactgccactgaaaat
gttcgtgtggatatcatcaattccctgaagatgaaagacccatatgttgcaattggatca
tttgatcgtaagaacatcttctatggtgtcaagcatcataatcacagtcaatcatttctg
gatgagcttgtgcaagaaatttcaagattagtagccaatgcaggctcaactatcatttac
tgccttacaattaaagaggttgagcggatattcaagtcactccagaaggcaggaattaag
gctggaatctaccatggtcaaatgggcagtaaagctcgtgaggagtctcacagattgttt
ataagagacgaactgcaagtaatggttgcaactattgctttcggtatgggaattgataag
ccaaatgtaaggcatgtcattcattatggttgtccaaaaagtatagaggcctattatcag
gaaagtgggcgatgtggtagagatggcatggcttctgtctgctggctttattacacagga
agtgactttgcaaaggcagagttttattgtggggaatcacaaagtgaaaatcataaaaga
gccatcagggagtcactgatggctgggcagcgctattgcttacttacgacttgcagaaga
aagttcttgctagatcactttggggaaaaactttcaactgacaattgtggaaattgtgac
aactgtttggtctcaagaagggagcgtgacatgtctaaggaatcatttttattgatggct
tctattcaatcatgtgggggtaactggggccttaagatgcccatagatgtccttcgaggc
tctcgatcaaaaaagattgttgatgcacagtttgacaagcttccacttcatggacttgga
aaaagttactcttcaaactggtggaaagcactggcacaccaactaatatctcatggctat
ttgatggagactgtcaaagatgtgtaccgaactgtaagtgttagtccaaaagggaaacaa
caccttagttctgctggacctgatcatcagtcaccattatatttgccgctgactgatgaa
atgcttgatgatgaggaccaagatagcacatcaggagaaattcggaaggttaagaatttg
gcccccttggacaatgaaggattctcagaggcagaggcacaactctatcgcctgctttta
gaagagagaatgaagcttgccagagccattggaactgctccatatgctgtatgtggtgat
gaaacagtaaaaagaattgcattgataaggccatctaccaaagcaagatttggaaacatt
gatggtgttaaccagcaccttgtaaggacacatggggattatcttcttaacattatcagg
catctatcagaaagcctaaacctctctttggatggggaagcatccttccagactgctata
ccaaaagcacatcctgtattgaacaaccagagaaaaatagctcctgcaaagtatgacgct
tggaaaatgtggcatgcagatggcttatcagttcagaaaattgctaacttccctggtaga
cctgctcctataaaggaacaaactgttcttcaatatcttctggatgctgctcaagaagga
tttgagattgattggaccagattatgcagtgagattgaattgacacatcaaatgttctcg
gacatctgtgatgcagtgtcaaagattggctctagagagaagttgaagcctattaaagat
aaattaccagaagagacaagttatacacatatcaggacatgtttggtaatgcagagctat
ggaatatctccagaagtagttgcgccttgttgcaatccacagaaaacagctgaactatca
agtgaggctgtcgaatcatgcttgattgatgcatgccacactaaaagtccgcatgaattt
gacatgtcaggcaatagtatggttcatttttcgtcctctaaaaacttaactagtgcccag
ggacccaagttggacctggactgcaatgatgatctggtctcaagtaaacgccacaaactt
gtacataaaggaagttcaactgcatcagaggcaacagaagatttgatattaaactggttg
aagaatcatgatgaaggggttccgctatctgctatcgtggagcacttccatggatccaac
aaggagcacgtggtgaaactattgggtaaccttgaaagtgattttatggtatttagaaag
aaagatttgtataggcttatgtaa
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