Durio zibethinus (durian): 111300133
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Entry
111300133 CDS
T05242
Name
(RefSeq) DNA-directed RNA polymerase II subunit 1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03020
RNA polymerase
dzi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111300133
09124 Replication and repair
03420 Nucleotide excision repair
111300133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111300133
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111300133
Enzymes [BR:
dzi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111300133
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111300133
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111300133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
TACC_C
Motif
Other DBs
NCBI-GeneID:
111300133
NCBI-ProteinID:
XP_022751509
UniProt:
A0A6P5ZFF2
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK
FKQALKIKNPKNRLKKILDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI
DGMKMIAEYKAQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR
PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS
EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIR
DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAVLKPRALWTGKQVFNLIIPKQIN
LLRASAWHSETETGFITPGDTQVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISTAKEDVKKLIIKAQNKDL
EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT
ACVGQQNVEGKRIPFGFIDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAMGGRE
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK
LDSLKMKKSEFDRVFRYKIDDENWNPISFMLPEHIEDLRTIQELRDVFDAEVQKLEADRY
QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV
PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEE
VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
MNDEAPKGELTDESAEDDVFLKKIESNMLSEMALRGIPDINKVFIKHGKASKFDEADGYK
TGEEWVLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESD
YLRGVTENIILGQLAPIGTGDCALYLNDEMLKNAIELQLPSYMEGLEFGMTPARSPVSGT
PYHEGMMSPSYLLSPNLRLSPISDAQFSPYVGGMAFSPASSPGYSPSSPGYSPSSPGYSP
TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPS
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPVYSPTSPAYSPTSPAYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSY
NPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPY
NTGVNPDYSPSSPQYSPSAGYSPSAPGYSPSSTSQYTPSNKDDHATKDDRNSKDDRSKH
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcgattcccttactcgcctgcggaggtcgccaaggtccgcatggtccagttt
ggcatcctcagccccgacgaaattcggcaaatgtcggtggtgcagattgagcatggtgaa
acgacggaaaggggaaaacctaaagtgggcggtttaagtgacccgcggctgggcacaatt
gataggaaaatgaagtgtgagacgtgtacggccaacatggcagagtgtccagggcatttt
gggcacttggagcttgccaagcctatgtttcatattgggtttatgaaaactgtgctcagt
ataatgagatgtgtctgcttcaattgctctaaaattcttgctgatgaggaagaccataaa
tttaagcaggcattgaagataaagaatccaaagaacaggctgaaaaagatcttagatgca
tgcaagaataaaactaaatgtgagggtggtgatgagattgatgtccaaggtcaagatact
gaggagccagtaaaaaagagtcgtggtggctgtggtgctcagcagccaaagctaagtatt
gatggtatgaagatgattgctgagtataaggcccaaaggaagaggaacgatgatcaggaa
caacttcctgaacctgtagaaagaaaacagactcttactgctgaacgggttcttagtgtc
ttgaagaggataagtgatgaggactgccaactattaggcttgaatcctaagtatgctcgt
ccggattggatgattcttcaagtacttccaatacctccacctcctgtgagaccctctgtg
atgatggacacttcctctcggagtgaggatgacttaacacatgcgttggctatgattatt
cggcacaatgagaacttgaggagacaggagagaaatgggtcacctgcacatataatatcc
gaatttgcacagttgttgcagtttcatgtagcaacatattttgacaatgagttacctgga
ctgcccagggctacacagagatctgggaggcctattaaatctatttgtagtaggcttaag
gcgaaagagggccggattaggggtaacttgatgggaaaaagggttgacttttcagctcga
acagtaattacaccagatccaaatatcaacattgatgaacttggagtaccttggagtatt
gctttaaacctcacatatccagaaactgttactccatataacattgagaggttgaaagag
cttgtggaacatgggccccatcctccaccaggaaagaccggtgctaaatatatcataaga
gatgatggacaaaggcttgatctccgttacctgaagaaaagtagtgatcatcacctagaa
cttggttataaggtggagcggcatttaaatgatggagattttgtcctttttaatcgtcaa
cctagtctccataaaatgtcaatcatgggccatagaatcaagattatgccatactcaacg
tttcgtctaaatttatctgttacttctccgtacaatgctgattttgatggtgatgaaatg
aatatgcatgttcctcaatcgtttgagacaagagcagaggtgttagagctcatgatggtg
cccaagtgcattgtgtcccctcagtcaaatagacctgttatggggattgtccaggataca
cttttaggatgccgtaaaatcaccaagagggatactttcatagaaaaggacgttttcatg
aatatattaatgtggtgggaagactttgatggaaaggttccggcccctgcagttctaaag
ccacgagcgctttggacagggaagcaggtttttaatcttatcataccaaagcagataaat
ctgctgagagcttctgcctggcattcagaaaccgagactgggtttatcacccctggggat
actcaagttcgaatagaaaaaggggagttgctgtctggcactctttgcaagaagacactt
ggaacatcttctggaagtcttatacatgtcatttgggaagaggttggtcctgatgcggcc
aggaaatttttgggacatacacaatggcttgttaattattggctgctgcagaatgccttt
agtattggtattggagatacaattgctgatgcagcaacaatggagaaaattaatgaaact
atttctacagccaaagaggatgtgaaaaagctcattattaaagcccaaaacaaggatcta
gagcctgaaccaggtagaactatgatggaatcctttgaaaacaaagttaaccaggtgttg
aataaagctcgtgatgatgcaggaaacagtgcccagaaaagtttgtcagaaagcaacaac
cttaaggcgatggtcactgcaggatccaagggaagtttcattaacatatcccaaatgaca
gcttgtgtcggtcagcagaatgttgagggaaagcgaatcccatttgggttcatagatcgt
acattgccccattttaccaaggatgattttggccccgaaagtcgtggttttgtagagaat
tcatacctgcgggggttgaccccacaagagttctttttccatgccatgggtggtagagaa
ggtctcatagatactgctgtaaagacttcagagactgggtacatacaaaggcgacttgtg
aaggctatggaggatattatggttaaatatgatggaactgttaggaactcattgggggat
gttattcaattcctctatggtgaagatggcatggattctgtatggatagaatctcagaag
ctggattctttgaagatgaagaaatcagaatttgatagggtcttcagatataaaatagat
gatgagaactggaatccaatttcttttatgttaccagaacatattgaagatttgagaact
atccaagaattgcgtgatgtgtttgacgctgaagttcaaaagcttgaagctgatagatac
caacttggaacagagattgcagtcacgggtgatagtaattggcctttgcctgttaacttg
aagaggcttatctggaatgcccagaagacttttaaagttgattttagaagggtgtcagat
ttgcacccagtggaaattgtagattctgttgataagctccaggaaaggttaaaggttgtt
ccaggtacagatcctctgagtgtggaagcccaaaagaatgcaaccctcttctttagtatt
ttgcttcgcagtactttggccagtaaaagggtgttgcaggaatatagactgacaaaagaa
gcatttgagtgggttattggtgaaatagagtcacgattcttgcagtctttagtagcacct
ggtgagatgataggttgtgttgctgctcaatcaattggtgagcctgctactcaaatgact
cttaacaccttccattatgctggtgtcagtgcaaagaatgttacccttggtgtccctagg
ttgagggaaattattaacgtagctaagaaaatcaaaacaccttctctttcagtctacctc
tctcctgaagctagtaagacaaaggagaaggccaagaatgtacaatgtgctttagaatac
actactcttcggagtgttactcatgctactgaagtatggtatgatccagacccaatgagc
acaattattgaggaggatattgactttgttaagtcctactatgaaatgccagatgaagag
gttgccccagaaaaaatctccccttggctgcttcgcatagagttgaatcgtgagatgatg
gttgataagaaattgagtatggctgacatagctgagaagatcaaccttgaatttgatgat
gatttgacttgcatatttaacgatgacaatgcagagaagctgatcctacgtatccgcatc
atgaatgatgaggctccaaagggtgaattgactgatgagtctgctgaagatgatgtattc
ctgaagaagattgaaagcaacatgctgtcagaaatggcccttcgtggtatccctgacatc
aacaaggtgttcattaaacatggtaaagcaagcaagtttgatgaggctgatggatataag
actggagaagagtgggtgctggatacagaaggtgtcaatcttttggctgtcatgtgccat
gaagatgttgattcaaggagaacaacaagcaatcacttgattgaagtgattgaagttctt
ggaattgaagcagttcgtcggtccttgttggatgaattgcgggttgtgatatcgtttgat
gggtcttacgtgaattatcggcatcttgctattctttgtgatacaatgacctatcgtggc
cacttgatggccatcacccgtcatggcatcaaccgcaacgatacagggcctatgatgagg
tgctcatttgaagaaactgtagatattctccttgatgctgctgtttatgctgagtccgat
tatttgaggggtgtgacagagaatataatattgggtcagcttgcaccaattggcaccgga
gactgtgcgttgtatctcaatgatgagatgttgaagaatgccattgaacttcagctacct
agttacatggaaggtctggaatttggcatgacacctgctcgttctccagtgtcaggaact
ccttatcatgaaggcatgatgtctccaagttacttgctgagcccgaatctccgtctctca
cccatttcggatgctcagttctcaccttatgttggtgggatggcattctctcctgcgtca
tcccctggttacagcccatcatctccaggatacagtccttcatctcctggttatagtcct
acctctcctggttacagtcctacatctcccgggtatagtcccacctctcctgggtacagc
cctacatctcctacttacagtcctagttcaccaggttacagtccgacaagtccggcatat
tctcctacaagtccctcttattctccaacctcgcctagctatagccctacctctccaagc
tacagtcctacatctccaagttacagtcccacttctccaagctatagtcccacatctccc
agctatagtccaacttcacctagctacagccccagttcacccgtttatagcccaacttct
ccagcatatagcccaacttcacctgcatatagccccacttctccatcatacagcccaaca
tccccatcatacagcccgacgtctccttcctacagcccaacctcaccctcctatagcccc
acatctccatcttacagtcctacttcaccagcttatagccccacttctccagggtacagt
ccaacttcaccaagttatagtccaacatcaccgagctatagccctacctctccaagttac
aatccacagtcagccaagtacagtccatctctggcatactcaccaagcagtccaaggttg
tctccttccagtccttacagtcccacatcaccaaattatagcccaacatcaccatcatat
tcaccgacttctccatcttattccccttcaagtccaacatacagtcctagcagcccatat
aatactggagtgaatccagactacagcccaagttcgccacagtacagtccaagtgctggg
tactcccctagtgctcccgggtattcaccatcatcaactagtcagtacactccaagcaac
aaggatgatcatgcgaccaaggatgatagaaacagtaaagatgacaggagtaaacattga
DBGET
integrated database retrieval system
