Durio zibethinus (durian): 111302858
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Entry
111302858 CDS
T05242
Name
(RefSeq) CHD3-type chromatin-remodeling factor PICKLE-like isoform X1
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111302858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dzi03036
]
111302858
Chromosome and associated proteins [BR:
dzi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
111302858
Chromatin remodeling factors
NuRD complex
111302858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDII_SANT-like
DUF1087
Helicase_C
Chromo
HDA2-3
ResIII
PHD
CHDCT2
Myb_DNA-binding
C1_2
C1_1
zf-HC5HC2H
PHD_4
Motif
Other DBs
NCBI-GeneID:
111302858
NCBI-ProteinID:
XP_022754458
UniProt:
A0A6P5ZNR7
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MSSLVERLRVRSDRKPIYSLDESDDDADFVSGKSGKTEMLERIVRTDAKENSCQACGESE
NLLSCETCTYAYHLKCLLPPLKAAPPPDNWRCPECVSPLNDIDKILDCEMRPTVADDNDA
SKLGSKQIFVKQYLVKWKGLSYLHCTWVPEKEFLKAFKSNPRLRTKVNNFHRQMTSNNSS
EDDFVAIRPEWTTVDRILACRGDDDDEEYLVKYKELPYDECYWEFESDISAFQPEIERFN
KIQSKSHKSSASKQKSSLRDAFESKKKSKEFQQYEHSPDFLFGGSLHPYQLEGLNFLRFS
WSKQTHVILADEMGLGKTIQSIAFLASLFEENVAPHLVVAPLSTLRNWEREFATWAPQMN
VVMYVGSAQARAVIREYEFYHPRSHKKIRKKKSGQIVSESKQDRIKFDVLLTSYEMINLD
TASLKPIKWECMIVDEGHRLKNKDSKLFLSLKQYTSYHRTLLTGTPLQNNLDELFMLMHF
LDAGKFGSLEEFQEEFKDISQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVEL
SSKQKEYYKAILTRNYQILTRRGGPQISLINVVMELRKLCCHPYMLEGVEPDIEDANEAY
KQLLESSGKLQLLDKMMVKLKEQGHRVLIYSQFQHMLDLLEDYCTYKNWQYERIDGKVGG
AERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHR
LGQTNKVMIYRLITRGSIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGSKE
LFADENDEAGKSRQIHYDDAAIDRLLDREQVGDEEASVDDEEEDGFLKAFKVANFEFIEE
AETVAEEEAQKVAVENKNTMNNSERTSYWEELLRDRYEVHKVEESNALGKGKRNRKQMVS
VEEDDLAGLEDVSSDGEDDNFEAELTDGDTTSSGNQSGRKPYRKRVRVDNMEPIPLMEGE
GKSFRVLGFNQSQRAAFVQILMRFGIGDFDWKEFASRLKQKTYDEIKDYGTLFLTHIAED
ITDSPTFSDGVPKEGLRIQDVLVRIAVLLLVSKKVKDASEKPGTRIFTDDIIMRYPTLKG
GKFWKEEHDLLLLRAVLKHGYGRWQAIVDDKGLTIQEVICQELNLPFINLPVPGQAGSQV
QNGANTTNVESTGNQTRGNGSGNDVGGEVAQGVADAVNQAQLYQDSSILYHFRDMQRRQV
EYIKKRVLLLEKGLTAEYQKEYYGEMKTNELASEEQENGQKVEDMPNARSTEIPSQVIDH
LPPTEVIASEEISAAACNDDADRLKLPQHYNKVCKILEDNVEVVQSRLDLKKNLHSLEEI
CGDISWILSPAQHNPHTSEKSAPSQKESQSTAAGSISLPNQQPAFVTEIEMEDAPRESKP
EKPAIVDEIGIDLTGSDPLKDSSSDWRQDPIKKDSKLACGVSASADSSQIDSKCLSQETN
GNDVVTMEETGNEDSGKSDAMASGTERGSTKKSGAGVIVLDD
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcttggttgagaggcttcgggttagatcagatcgaaagccaatttatagtctg
gatgaatcagatgatgatgccgattttgtgtctggaaaatctggtaaaactgagatgtta
gaaaggatagtcaggactgatgcgaaagaaaactcgtgccaagcctgtggagagagtgag
aatctcttgagttgcgaaacatgtacttatgcgtaccacctaaagtgtttacttccccca
ttaaaagctgctccacctcctgacaactggagatgccctgaatgcgttagccctctgaat
gatattgacaagatattggattgtgaaatgcgtcctactgtggctgatgataatgatgct
tccaagctgggttcaaaacaaatatttgtgaaacagtatcttgtgaagtggaaaggatta
tcttatttgcattgcacttgggtacctgagaaggagttcctaaaagctttcaagtccaat
cctcgtttaaggaccaaggtgaacaacttccatcgacaaatgacatcaaacaatagctct
gaagatgactttgttgccattagacctgagtggacaacagttgatcgaattcttgcttgc
aggggagatgatgatgatgaggagtaccttgtgaagtataaagaacttccttatgatgaa
tgttattgggagttcgaatcagacatatctgcatttcaacctgaaattgagagatttaat
aaaattcagtccaaatctcataaatcttctgctagtaagcaaaaaagcagccttcgagat
gcttttgagtccaagaaaaaatcaaaggaatttcaacagtatgaacatagtcctgacttt
ctttttggaggctctttgcatccttaccaacttgaagggctgaacttcttgcgtttttct
tggtccaaacaaacacatgtaattcttgctgatgagatgggccttggtaaaaccatccag
agtattgcttttttagcatctctttttgaagagaatgttgctcctcatttggtagtggca
ccactttcaacattacggaactgggaacgggagtttgcaacatgggctcctcaaatgaat
gttgttatgtatgttggctctgcccaagcccgtgcagttataagggaatatgaattttat
catcctagaagtcataaaaagatcaggaaaaagaaatctggtcaaattgttagtgaaagc
aagcaagataggataaagtttgatgtcctgttaacatcatatgagatgattaacttggac
acagcatcattgaagccaataaagtgggagtgcatgatcgttgatgaaggtcatcggctc
aagaataaggattcaaagttgtttctttcattgaagcagtataccagttaccaccgcact
cttttgactggaactcctcttcagaacaatctggatgaacttttcatgctaatgcacttc
cttgatgccggaaagtttggaagtttagaggagttccaggaagaatttaaggatatcagt
caggaggagcagatttctagacttcataaaatgttggccccacatctccttagaagggtg
aagaaggatgtcatgaaggaacttcctcccaagaaggaactcattttacgtgttgaatta
agtagcaagcagaaagaatattacaaggcgattttgactcgtaactatcaaatacttacc
cgacgtggtggtccacaaatatctctaatcaatgtggttatggagttgcgaaaactatgt
tgtcatccttatatgttggaaggggttgaaccagatattgaagatgcaaatgaggcttac
aaacagctcttggaatcatctggaaaattgcaactgttggacaagatgatggtaaagctt
aaagagcagggacatagagttcttatatattcacaattccagcacatgttggacttactg
gaggattactgtacttacaagaactggcagtatgaacgtatagatggaaaggttggtgga
gctgagaggcagatacgcatagatcggtttaatgccaaaaactcttcccggttttgtttt
ttgctttctaccagagctggtggcttgggtataaatcttgctactgcagatacggttatc
atttacgatagtgattggaatccccacgctgatttacaagcaatggctagagctcatcgg
ctcgggcaaacgaacaaggtgatgatttatcggctcataactcgaggatccatagaagaa
aggatgatgcagatgaccaagaagaaaatggttttggagcatcttgttgttgggaggcta
aaggctcaaaatattaatcaggaggagttggatgacatcatcagatatggctcaaaagaa
ctatttgctgatgagaatgatgaagcaggaaagtctcgtcaaattcattatgatgatgct
gctattgatagattacttgatcgtgaacaagttggcgatgaagaggcctcagtggatgat
gaagaggaggatggatttttgaaggcctttaaggtagctaattttgaattcattgaggaa
gcagaaactgttgcagaggaagaagctcaaaaggtggccgtggaaaataaaaataccatg
aacaattctgaaagaacaagttactgggaagagttgttgcgagacagatatgaagttcat
aaagttgaggagtccaatgctctgggaaaaggaaagagaaaccgtaagcagatggtatct
gtagaagaagatgaccttgctggtttggaagatgtaagctctgatggtgaggatgataac
tttgaagctgaattgactgatggtgatacaacttcctctggaaatcaatctgggagaaag
ccttacaggaagagagttcgtgtggataacatggagccaattcctctgatggaaggtgaa
gggaagtcattcagggtgcttgggttcaatcagagtcagagggctgcatttgtacagata
ttgatgaggtttgggattggggattttgactggaaggagtttgcatctcgcttaaaacag
aagacttatgatgaaataaaagattatggtactcttttcctgactcatattgctgaagat
ataaccgactctcctacattttcagatggtgttccaaaagaaggtctcagaattcaagat
gtactggttaggatagctgtcctgcttttagtaagcaagaaggtgaaggatgcatcagaa
aaacctggcacccgcattttcaccgatgatattatcatgcgctaccccacattaaagggt
ggaaaattttggaaagaggaacatgatttgttgttactgcgtgctgttttaaagcatggg
tatggaagatggcaggctattgttgatgataaaggcttgacaattcaggaggtcatttgt
caagagttgaatcttccctttataaatcttcctgttccagggcaagctggttctcaagtg
caaaatggtgctaatacaaccaatgtagaatcaacaggaaaccagactcggggaaatggc
tctgggaatgatgtaggaggtgaggttgcccaaggagttgctgatgctgtgaaccaagca
caactgtaccaggattcttccattttgtatcattttagagatatgcagagaaggcaggtt
gaatatatcaagaaaagggtgcttctcttggaaaaggggctcactgcagagtatcagaaa
gaatattatggtgagatgaaaacaaatgagctggcaagtgaagagcaagagaatggacaa
aaggttgaagacatgccaaatgcaaggtcaacagagatcccttcccaagtgattgaccac
ttacctccaacggaagtaattgcatctgaagaaatttcagcagctgcttgcaatgatgat
gcagatcgattgaaattgcctcagcattacaataaggtttgcaagatattggaggacaac
gttgaagttgttcagtcaaggctggatttgaagaagaacctccattctttggaagaaatt
tgtggggacatatcttggattctttcacccgcacagcacaatcctcatacttcagagaag
tctgcaccttcacagaaggaatcacagagcactgcagctgggtccatttcactacctaat
caacagcctgcctttgtgactgaaattgagatggaggacgcaccaagggaatctaaaccg
gagaaacctgctattgtggacgaaattggcatagatttaacaggatctgatccacttaaa
gatagcagctcagattggcgccaagatccaataaaaaaagatagtaaattggcatgtggt
gtttctgcttcagcggattcatctcagattgactcaaaatgtttgtcacaagagactaat
ggaaatgatgttgtgacgatggaagaaacagggaatgaagacagcggcaaatctgatgct
atggctagtggaactgagaggggaagcacaaagaaatctggagcgggagtcattgttttg
gatgattga
DBGET
integrated database retrieval system
