Durio zibethinus (durian): 111313761
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Entry
111313761 CDS
T05242
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111313761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111313761
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111313761
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111313761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
WEF-hand
Motif
Other DBs
NCBI-GeneID:
111313761
NCBI-ProteinID:
XP_022770229
UniProt:
A0A6P6AZE0
LinkDB
All DBs
Position
Unknown
AA seq
2407 aa
AA seq
DB search
MLKLSTTLSTHVRFLLRSVTEANADSVIRELCQFFEYGIEGSILVLQTCLDCLHSHMTDS
KLQSEQVIASIFRHAMDKPNFCTVFCHSLRSMDISEDFLENFSKAIQLSVSEKIGLSLAL
FDSESPDIRMCGKNFCMAQIEELHSNPASVDSSEQIQNIVMFLRCSDALSKHVDSFMQML
SLVQEKDVAQFILNPILSDELREANFLRNMDFFNESGENDFDALLAEMEKEMSMGDIIKE
LGYGCTVDVAHCKDILSLCSPLTEITISRILGTIASTYVGLEDNQTTFSTFSLALGCSTL
PDLPPLSSWNIDVLIKTIKQLVPGTNWIRVIENLDHEGFYIPNEAAFSFFMSVYRHACQE
PFPLHAICGSVWKNIEGQLSFLKYAVSAPPEVFTFAHSLRQLAYIDAVHGHKLYLGNENH
AWLCLDLLDVLCQLAERGRTSFVRSMLEYPLKHCPEVLLLGMAHVNTVYNLLQHDVTSTV
FPMIIKNAMGAGMILQLWHVNTSLVLRGFVEVHNTEPDSMIRILEICQELKILSSVLEMI
PFPSGIRLAVLASRKEVIDFEKWLSGNLNTYKDVFFEECLKFLKDIQFSGSQEFSARPFH
HTTTVLNFYLETSSTFFKVLKANSEVIASTQLLDEMERLHATIMDSNPKLQNGGTTDSST
SDGYGDDIEGEANSYFHQMFSGQLTIEAMVQMLARFKESSVRREQLIFECMVANLFEEYR
FFPKYPERQLKIAAVLFGSVIKQQLVTHLTLGIALRGVLDALRKPADSKMFLFGTKALEQ
FVDRLIEWPQYCNHILQISHLRATHSELVTFIERALARISSGHLESDGSHNPSVHHQVSS
QVAPGNGELNSSNISLPGPQLSSPLQLPRHDSSSDERNKIPPTSSNDVKPLLSSVGQPSV
APLSDASSIQKLQSAVSGSSMLSASPGFVRSSRGVTSTRFGSALNIETLVAAAERRETPI
EAPASEVQDKISFIINNISAANIEAKGKEFTDILKEQYYPWFAQYMVMKRASIEPNFHDL
YLKFLDKVHSKALNKEIIQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ
VLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTIGILALLAEIY
SMPNLKMNLKFDIEVLFKNLSVDMKDITPTSLLKDRKRELEGNPDFSNKDVGASQPQMVA
EVKSGIITPLNHVELPLEVASPPNSSGHTHLLSQYAGPLRLSTGALMEDEKLAALGLSDQ
LPSAQGLFQATPSQSPFSVSQLSTPIPNIGTHVIINQKLSALGLHLHFQRVVPIAMDRAI
KEIVAGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPL
RGSISSQLRNSLQGLNVGSDLLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIANQ
LSLRRKHRDPAFFDPSMYGQGSMGVMSEALRPKPGHLSLSQQRVYEDFVRLPWQNQSGQS
SHSMSGAPSSLSGDAGLTGTFGSTSGQVTPGYSSGPGNLAQLDVASEAIESTSAAPLSAS
SIHIGPAAGLTPQTTENDPLNDSLSYTTSAPELHSVDTDAVKELGPASQPLPSPAVTERL
GSSISETSLSTRDALDKYQIVAQKLETLVTSDGREADIQGVISEVPEIILRCVSRDEAAL
AVAQKVFKGLYENASNSLHVSAHLAILAAVRDVCKLAVKELTSWVIYSDEERKFNKDITV
GLIRSELLNLAEYNVHMAKLIDGGRHKAAMEFAMSLLQTLVSDESRVISELHNLVDALAK
VALKPGSPESLQQLIEMVRNPSSSLAASSSATVGKEDKARQSRDKKAPSPTPANREDNSN
IEALEPDPAGFKEQVSMLFAEWYQICERPGANDGPCNHYIIQLHQNGLLKGDDMTERFFR
IITELSVAHCLSSEVMSSGTLQSPQQAQTLSFLAIDIYSKLVLSVLKYCPVEQGSSKLFL
MSKILNMTMRFIQKDAEDKKASFNPRPYFRLFINWLLDIGSLDPVTDGANFQILTAFANA
FHALQPLKVPAFSFAWLELVSHRSFMPKLLTGNAQKGWPYIQRLLVDLLQFLEPFLRNAE
LRGPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLP
DPSTPNLKIDLLPEIREPPRILSEVDAALKAKQMKADVDEYLKTKLQGGSFLTELKQRLL
LSPSEAASAGTRYNVPLINSLVLYVGMQAIQQLQSRVPHAQSTANTVPMTVFLVGAALDI
FQSLIGDLDTEGRYLFLNAIANQLRYPNNHTHYFSFILLFLFAESNQEIIQEQITRVLLE
RLIVNKPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVARSCGGLKPVDESG
WVSDNAH
NT seq
7224 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagctttctacgacactctcaactcacgttcgtttcctgctccggtccgtgact
gaagccaacgccgactcagttattcgagagctctgccagttctttgaatatggaatcgag
ggcagcattctggtgctgcaaacctgcttggattgcttgcattctcacatgacagattcg
aagttgcaatctgagcaagttatagcatcaatttttagacatgccatggacaagccaaat
ttttgtactgttttctgtcattcactgagaagtatggatatcagtgaggatttcctggag
aatttctcaaaagctattcagttatcggtgtctgaaaaaattggccttagtcttgctttg
ttcgattctgaaagtcctgacataagaatgtgtgggaagaatttctgtatggctcagatc
gaggaattgcactccaatccggcctctgttgattcttccgagcaaattcagaatatagtt
atgttcctccggtgctccgatgccctttcaaagcacgtagattcctttatgcagatgtta
tctctagttcaagaaaaagatgttgcgcagttcattttaaacccaatactttctgatgaa
ttgcgtgaggctaatttcttgaggaacatggatttcttcaatgaatctggagaaaatgat
tttgatgctcttttagcagaaatggagaaggagatgagcatgggggatatcattaaggaa
ctaggttatggctgcaccgttgatgttgcacactgcaaagatattttatctctttgctca
cctttgacagagataactatatcaagaatacttggcacaattgctagcacctatgtcggg
cttgaggacaaccaaaccacattttcaacattcagtctggccctcggttgcagcacttta
cctgatttacctccattgagctcctggaacattgatgttcttataaaaactataaagcaa
ctggttcctggtaccaactggattcgagttattgaaaacctagatcacgaggggttctac
attcctaatgaggcagcattctcctttttcatgtctgtatatcgacatgcgtgccaggaa
cccttccctctccatgccatttgtggctctgtgtggaagaatattgaaggtcagctatct
tttctaaaatatgctgtatcagcacctccagaagtatttacctttgcccattctttgagg
cagctggcctatatagatgcagtgcatggccataagctttaccttggaaatgaaaatcat
gcctggctatgtcttgacctcctagatgtgctgtgtcaactagctgaaaggggtcgcacc
agctttgttcgatcaatgctcgagtatcccttaaaacactgccctgaagtcctgcttctt
gggatggcacatgttaatacggtctataatctccttcagcatgatgtgacttccacagtt
tttccaatgataattaaaaatgccatgggtgctggtatgatacttcaactttggcatgtg
aacactagtcttgtcttgcggggatttgtagaagtacacaacactgaacctgacagcatg
attagaatattggaaatttgtcaagagttaaagattctatcatcagtgttggagatgata
ccttttccttctggcatcagattagcagtccttgcttccaggaaagaggttatagatttt
gagaagtggttgagtggtaacctgaatacatataaagatgttttctttgaggagtgccta
aagttcttgaaggatatacaattcagtggatcacaagagttttctgccaggcccttccat
catactactactgttttaaatttttatttggaaactagttctacctttttcaaggtcctt
aaagctaattctgaggtgatagcctctactcagcttcttgacgaaatggaaaggttgcat
gcaacgatcatggattctaatccaaagctgcaaaatggtgggactacagattcctcaacc
tctgatggatatggagatgatattgagggagaagcaaattcttacttccatcaaatgttt
tctggtcagttgaccattgaagcgatggttcaaatgcttgcacgtttcaaggaatcttct
gtgagaagggaacaattgatatttgagtgcatggttgcgaatctgtttgaagaataccga
tttttccccaagtatcctgaaagacagctcaaaattgctgcagttctctttggctctgtt
atcaagcagcaacttgtaactcacctcactcttggaattgccttgcgtggtgttttagat
gcattgcgtaaacctgctgattcaaaaatgtttttgtttggaaccaaggccttggagcag
ttcgtggatcgtctgattgagtggccgcagtattgcaaccatattttacagatatctcac
ctgcgtgccactcattcagagcttgtcactttcattgaacgagctctcgccaggatttca
tctgggcacttggagtcagatgggagccacaatccttctgttcatcaccaagtttcctct
caggttgccccaggaaatggggagttaaatagctctaacatctctctgcctgggccacaa
ctttcttcaccacttcagcttccaagacatgatagttccagtgatgagcgtaataaaatc
cctcctacatcatctaatgatgtgaaaccccttctatcttctgtagggcagccttcagtt
gctcccttgagtgatgcttctagcattcaaaaactgcagagtgcagtcagtggttcatct
atgctgtctgcttcccctggttttgttcgttcttctcgaggagttacttctactagattt
ggttctgctttgaacattgaaacactagttgctgctgctgagagaagagagacgcccata
gaggctccagcatctgaggttcaggacaagatatcatttataatcaataatatttcggct
gcaaatatagaagctaaagggaaagagttcactgatatattaaaagagcaatattatccc
tggtttgcccagtatatggttatgaaaagagcaagcattgaaccaaattttcatgatttg
tatttgaagttccttgataaagttcactcaaaggctttgaataaggagattatccaagct
acatatgagaactgcaaggttttgttgggatcagagcttataaaatcaagctcagaagag
cgatcattgctaaaaaatttgggtagttggcttgggaagttgacaattggccggaatcaa
gttttgagggctcgtgaaatagatcccaaatctttgatcatagaggcgtatgagaagggg
ttgatgattgcggttatcccatttacttcaaagattcttgagccatgtcaaagcagtctg
gcatatcaaccccctaatccctggaccataggcattctggcattattagctgagatttat
tcaatgccaaacttgaaaatgaatctcaagtttgacatagaggttctattcaagaacctt
agtgtggatatgaaggacattacgccaacttctcttcttaaggatcgtaaaagagaactt
gaggggaatcctgatttttctaacaaagatgttggagcatcccaaccccagatggttgcg
gaagttaaatcgggaattattactccacttaatcatgttgaactacctctggaggttgct
agtccacctaattctagtggccacacacatttattatctcagtatgccggtcctttgcgt
ctctctactggtgctttaatggaggatgaaaaactagcagctttaggcttgtctgatcag
cttccttctgcacaagggctatttcaagcaactccatcacagtcacctttttctgttagt
cagctttccacgccgatacctaacattggaactcatgttattatcaatcagaagcttagt
gcactaggcttgcacttgcattttcagagggtggttccaattgcaatggacagggctatc
aaagagattgtagctggtattgttcagcgaagcgtttctatagcaactcaaacaacaaaa
gagcttgttttaaaggactatgctatggaatcagatgagacacggatctataatgcagca
catttgatggttgcaagtttggctggaagcctagcacatgtaacatgcaaggaacctttg
cgtggctctatatcaagtcagctgaggaattcacttcagggtttgaatgttggaagtgat
cttctagaacaagctgttcagctcgttactaatgataaccttgatcttggctgtgcggtc
atagaacaggctgctactgataaggcaatacaaaccattgatggagaaatagctaatcaa
ctttctttaagaagaaagcatagggatcctgcattttttgatccaagcatgtacgggcaa
ggttctatgggtgtcatgtctgaggctcttcgacctaaaccaggtcacttgtctttgtct
cagcagcgagtttatgaggactttgttcggcttccttggcaaaatcaatctggccagagc
tcacattccatgtctggtgctccttcaagcttatctggtgatgctggtcttactggcaca
tttggttcaacatcagggcaagttacccctggttactcatctggcccaggaaacttggca
caattggatgttgcttctgaggcaattgaatctacctcagctgcccctttgagtgcttcc
tcaattcatattggcccagcagctggtctgaccccacagactactgaaaatgatcccctc
aatgattcattgtcttatacaacttcagcccctgaattacattcagttgatactgatgct
gtcaaagaattgggacctgcatcacagccgttaccttcacctgctgtcactgagcgtctt
ggaagtagcatctcggagacttcattgagcacaagggatgcattggataaatatcagatt
gttgctcagaagttggaaactttagtgacaagtgatggtagagaagctgacattcaggga
gtgatctctgaggtacctgaaatcatactcagatgtgtaagtcgggacgaggcagcactg
gctgtagctcaaaaggttttcaagggcttatatgagaatgcatcgaacagtcttcatgtc
agtgcccatcttgctattctggctgctgtccgtgatgtttgtaagcttgctgttaaggag
cttactagttgggtgatatattcagatgaggagcgaaagttcaacaaagatatcactgtt
ggccttattcgaagtgaattgctgaaccttgcagagtacaatgttcatatggcaaaactt
attgatgggggaaggcataaagctgcgatggaatttgcgatgtcacttcttcaaactttg
gtctctgatgaatcgagagtcatatcagaactccacaatcttgttgatgcattggcaaag
gttgctttgaaaccaggatctcctgaatcattgcaacagttgattgagatggtcagaaat
ccatcttccagtttggctgcttcatccagtgccactgttggaaaagaggataaggctagg
caatctagagacaaaaaggcacctagtcccacaccagctaacagggaagataatagtaat
atagaggctctggaaccagatcctgctggcttcaaggagcaggtatccatgctgtttgca
gaatggtaccagatatgtgagcgtcctggtgcaaatgatggaccttgtaatcattacatc
atacaattgcatcaaaatggactgcttaaaggggatgatatgacggaacgctttttccgt
attatcacggaactatctgttgcacattgcctatcttctgaggtcatgagttctggcaca
ttgcaatcacctcagcaagcgcagactctttctttccttgccattgatatttattccaaa
cttgtgctgtcagtccttaagtattgcccagtagaacagggatcaagtaaactctttctg
atgtccaagattttgaacatgactatgagatttattcaaaaagatgcagaggataagaaa
gcatcttttaatccaagaccatatttcagattatttatcaactggctgttagatattggt
tccttggaccctgtcacagatggtgcaaattttcagattttgacagcctttgccaatgca
tttcatgctttgcagccccttaaagttcccgccttcagctttgcatggctagagcttgtc
agtcatagaagtttcatgccgaaattgctcactgggaatgctcagaagggttggccctat
atccaacggttgctggtggacttgcttcagttcctggagccgtttttgaggaatgctgag
cttagagggccggttcattttctgtataaaggcacactgagggtgttgctagttctgctt
catgactttcctgagttcctgtgtgattatcattttaccttctgtgatgtgattcctccg
agctgcatacagatgcggaatattatccttagtgcatttccacgcaatatgaggctgcca
gatccatctacacccaacctaaagattgatttgcttccagaaatcagagaaccccctcgc
atcctctctgaggttgatgctgctcttaaagcaaaacagatgaaggctgatgtagatgag
tatctcaagactaagctacaaggaggatcatttctaactgaactgaaacaaagactgctc
ctttcacctagtgaggcagcatctgctggtacccgttataatgtaccattaatcaactca
ctggtgctttatgttggaatgcaggctatccagcaactgcagtcaagagtacctcatgca
cagtcaacagcaaacactgttccaatgactgtgttcttggttggtgctgccttggatatt
ttccagagcctaataggggaccttgatactgaggggcgctatctttttcttaatgcaatt
gctaaccaattgcgatacccaaacaaccatacacattacttctccttcatcttactattc
ttatttgccgaatcaaatcaggaaattatccaagagcaaattacaagagttctgttggaa
cggttaattgttaataaacctcacccgtggggtctccttattaccttcattgagctcata
aagaatccaagatacaacttctggaatcgatcattcataaggtgtgcacccgagattgaa
aaactctttgaatctgttgcacgatcttgtgggggcctgaaacctgtggatgagagtggt
tgggtatccgacaacgcacattaa
DBGET
integrated database retrieval system
