Durio zibethinus (durian): 111317046
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Entry
111317046 CDS
T05242
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111317046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111317046
Spliceosome [BR:
dzi03041
]
Complex B
Other components
Prp19-related factors
111317046
Complex C
111317046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
RRM_3
zf-CCCH
zf-CCCH_3
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
111317046
NCBI-ProteinID:
XP_022775095
UniProt:
A0A6P6BDE0
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MAHRLLRDHEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
ESRYKKTEVCQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNKEYFAE
EHDRRARAGLDYESSYGKVRPNDTILKLQRTTPYYKRNRAHICSFYVRGECTRGAECPYR
HEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEAPEDESIKTLYVGGLDKRVT
EQDLRDNFYAHGEIESIKMVLDKACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGK
PQAPRPESETSEGARQQAAVAHSGMLPRSVISQQQNQFQPSGSGVQGQPPPMQYFNIPPP
PQLDRAFYPSMDPQRMGALVPSHDGENKSGSEKQQGQHYPSQAMPPPPPPHGQYPHQHYP
PYGYMQPMPPYQQYPPYHSAIPPPQHYQHSGPARPPPPVNAPSASTTPASASSGSAPPIP
GLSAASGSSHQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcacacagattgttaagagatcatgaggcagatggttgggaacgctccgacttccct
atcatttgtgagtcatgcctcggtgacaatccatatgtccgaatgactaaagcagattat
gataaggagtgcaagatttgtacgaggccatttacagtctttaggtggaggcctggtcgt
gagtcaaggtataagaaaactgaggtttgtcagacatgcagtaagttgaaaaatgtttgt
caagtctgccttttagatcttgaatacggattgccagttcaagttcgggatactgctctt
agtataaattccaatgatgccattccgaagagtgatgtgaataaagagtattttgctgag
gagcatgatcgcagggccagagctggtttagattatgaatcctcatatgggaaggtacgg
ccaaatgacactattctgaagcttcagagaacaacaccatactacaaaagaaaccgagca
catatttgcagtttctacgtgcggggtgaatgtacaagaggtgctgagtgcccttacagg
catgagatgccagtaacgggggagttgtcccagcaaaatataaaagaccgttactatgga
gtgaatgatccagtggcactaaagctacttaacaaggctggtgaaatgccttctttggaa
gctcctgaggatgaaagcattaaaaccctttatgtgggtggacttgataaaagggttact
gagcaagatttaagggataacttttatgcccatggtgaaattgaatcgataaagatggtg
cttgacaaggcatgtgcctttgtaacgtacacaaccagagaaggagctgagaaggctgca
gaagaactttctaacaagctagtcataaagggtctcaggctgaagctaatgtggggtaag
ccccaggcaccaagacctgagtcagaaacctctgagggagccaggcagcaggcagcagtg
gctcatagtggaatgttgccccggtcagtaatatctcagcagcagaatcaattccagcca
tctgggtctggtgtgcagggccaacccccacctatgcagtattttaatatcccacctcca
cctcagctggatagagccttctatccatcaatggatcctcaaaggatgggtgccctggtt
ccatctcatgatggggagaataaatctggatcagaaaaacaacaagggcaacattatcct
tctcaagctatgccgccaccaccaccgccacatgggcaatatcctcatcagcattatcca
ccgtatgggtacatgcaaccaatgccaccttatcagcagtatccaccatatcattcagca
atacctccaccccaacattatcagcattctgggccagcaaggccgccgcctcctgtgaat
gcaccttcagcaagcactacaccagcgtctgcttcatcaggttctgcacctcctattcca
gggctatctgctgcatccggttcatctcatcagtga
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