Peptoclostridium acidaminophilum: EAL2_c01490
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Entry
EAL2_c01490 CDS
T03061
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eac
Peptoclostridium acidaminophilum
Pathway
eac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EAL2_c01490 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eac03021
]
EAL2_c01490 (rpoB)
03400 DNA repair and recombination proteins [BR:
eac03400
]
EAL2_c01490 (rpoB)
Enzymes [BR:
eac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EAL2_c01490 (rpoB)
Transcription machinery [BR:
eac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EAL2_c01490 (rpoB)
DNA repair and recombination proteins [BR:
eac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EAL2_c01490 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AHM55482
UniProt:
W8TH06
LinkDB
All DBs
Position
129252..132974
Genome browser
AA seq
1240 aa
AA seq
DB search
MPFPHPVNTGRRARMSFSRIPEVAQLPNLVEIQLDSYKWFLEEGLREVFEDVSPIEDYTG
NLSLHFVDYSIGEAKYDVEESKERDVTFSAPLKVKVRLENKNTGEIKEPGKDVFMGDFPL
MTEKGTFIINGAERVIVSQLVRSPGVYFSEERDKAGKKLVSSTVIPNRGAWLEYETDSND
IVSVRVDRTRKQPITVLLRAFGFASDIEIIELIGEDERLLSTLEKDNTKNREEALLEIYK
KLRPGEPPTVESATSLINALFFDPKRYDLAKVGRYKFNKKLSVAHRIKGRVAAEDVVSSE
TGEVFVAKGEKISLENAFEIQNSGINVVKVYGEEGKEIKVVGNNFVDMRAFVDFEIEGFN
PKVKVHYPTLKEILDECSSNEEIAEAFKRNKRRLVPKHIILDDIIASVSYQFNLFHGIGN
IDDIDHLGNRRVRSVGELLQNQFRIGLSRMERVVRERMTIQDTENTSPEALINIRPVAAA
IKEFFGSSQLSQFMDQTNPLSELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPI
ETPEGPNIGLINSLSTFAKINEYGFIESPYRKIDKQRAVVTSTIDYLTADEEDLYVRAQA
NEPLDEEGRFVNERVTARTINGEAELVKPESVDYMDVSPKQVVSIATAIIPFLENDDANR
ALMGSNMQRQAVPLIRREAPVIGTGMEGKAAIDSGVCVMARNSGVAEKVTANEIVIKRED
GQRDRYKLLKFKRSNQGTCVNQSPIINSGDIITAGDVIADGPSTDMGELALGRNCRVAFM
TWEGYNYEDAILLNERLVKEDRLSTIHIEEYEAEARDTKLGPEEITRDIPNVGEDAIKNL
DDRGIIRIGAEVQSGDILVGKVTPKGETELTAEERLLRAIFGEKAREVRDTSLKVPHGES
GIIVDVRVFTRKNGDELPPGVNELVRVYIATKRKINVGDKMAGRHGNKGVISRILPEEDM
PFMEDGTPVEIVLNPLGVPSRMNIGQVLEVHLGLAAKKLGWHVATPVFDGANEKDIEIAL
EQAGYPQDGKLMLRDGRTGEPFDNRVTVGYMYMLKLHHLVDDKIHARSTGPYSLVTQQPL
GGKAQFGGQRFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGENIPEPGI
PESFKVLIKELQSLCLDVKVLEADQEIEIKESIDDEEISMEGEFEYVRDVNLEETMVIEE
GEQEEDLEEDLEEDADEFEDDDLDQEFFKADIEEEDDDEF
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccatttccacatcctgtaaacactggaagaagggctaggatgagtttttcaaggata
ccagaggtagcgcagctacccaaccttgtggaaatccagcttgattcctacaaatggttt
ttggaggaaggtctcagagaggtattcgaggatgtctcgccaattgaagattatactgga
aacctttcacttcattttgttgactattccataggtgaagcaaaatatgacgttgaagag
tcaaaagaaagagacgttactttttcagcaccgctgaaagtcaaagtgaggcttgaaaac
aagaacactggtgaaataaaagaaccgggaaaagatgtattcatgggagattttcctctt
atgactgaaaagggaactttcataattaacggcgcagaaagagtaatagtcagccagctt
gtaagatctccgggagtatactttagtgaagaaagggacaaggcgggcaagaagcttgtt
tcatccactgttatcccaaacaggggagcatggcttgaatatgaaacggattccaacgac
atagtgtctgtaagggttgacagaaccagaaagcaaccaataacagtgctgctgagggca
tttggattcgcaagcgacatagagataatagagcttataggagaagatgaaagactcctg
tctactcttgaaaaggataacacaaagaatagggaagaggcgctgcttgaaatatacaag
aagctaagaccaggcgaaccacctacggttgagagcgcaacatcgcttattaacgcattg
tttttcgaccctaaaagatacgaccttgcaaaggttggaagatataaattcaacaagaag
ctttcagtagcccacaggattaaaggcagggttgcagcggaagacgtggtttcttcagaa
acgggagaagtgtttgtagccaaaggcgaaaagatatcgcttgagaatgcattcgagata
caaaattccggaataaacgttgtgaaagtttacggtgaagaaggcaaggaaataaaagta
gtaggcaacaactttgtggatatgagggcttttgtggattttgaaatcgaagggttcaat
cccaaggtaaaagtccattatccaacactcaaggaaatactcgatgagtgttcaagcaat
gaagaaatagcggaggctttcaaaaggaacaaaagaagactcgttccaaagcacataata
ctagacgatatcatagcttctgtaagctaccagttcaacctgttccatgggatagggaat
atagacgacatagaccacctgggcaacaggagggtaaggtcggtaggcgagcttttacag
aaccagttcagaataggcctttcaagaatggaaagagtagtaagggaaagaatgacgatt
caggacactgaaaatacttctcccgaagcgctcataaacataagaccagtggctgccgcc
ataaaggaattcttcggaagctcacagctttcacagttcatggaccagacaaatccacta
tcagagcttacacacaaaagaaggctttcggctcttggaccaggaggtctttcaagagag
agagcaggctttgaggtaagagacgttcaccactcgcactacggcagaatgtgtcctata
gagactcctgagggtccaaatataggccttataaactcacttagtaccttcgcaaagata
aacgagtatggattcattgagtctccatacaggaagatagacaagcaaagagccgtggtt
actagcactatagactatctgacggcagacgaagaggacctttacgtaagagcccaggca
aatgagccgctcgacgaggaaggcagattcgtcaatgaaagagtaactgcaaggactata
aatggtgaggccgagcttgtaaaacctgaaagcgtagactacatggacgtatctccaaag
caggttgtgtcgatagcgacagcaataattccattccttgagaatgacgatgccaaccgt
gcgctgatgggatcgaacatgcagcgtcaggctgtacctcttataagaagggaagcgcct
gtaataggaacgggaatggaaggcaaggcggctatagattcgggcgtatgcgtaatggca
agaaattcaggagtcgcggaaaaggttactgcaaatgaaatagtgataaaaagagaagat
gggcaaagagacagatacaagctgcttaagttcaaaagatcaaaccagggcacatgtgtc
aaccagtctcctataataaatagcggcgatatcataacagcaggcgatgtcatagcagac
gggccttctacagacatgggtgagttggcacttggcagaaactgcagagtcgcatttatg
acatgggagggctacaactatgaggacgccatacttctcaacgaaaggcttgtaaaagaa
gacaggttatcgacgatacacatagaagaatatgaggctgaagccagagatacaaagcta
ggccctgaagagataacaagggacatccctaacgttggagaggatgcaatcaagaatctt
gacgacaggggaataataagaataggtgcagaagtccaatcgggagacatacttgtcggt
aaagttacgccaaagggtgagactgagctcactgcagaagaaaggcttctaagggccata
ttcggagagaaggcaagggaagtaagggatacatcccttaaggttcctcacggagaaagt
ggaataatagttgacgtaagagtatttacaaggaaaaacggcgacgagcttcctccggga
gtaaacgagcttgtaagggtttatatagcgactaaaagaaagataaacgtcggcgacaag
atggcaggacgccatggaaacaagggtgtaatctcaaggatacttccggaagaagacatg
cctttcatggaagacggtacgcctgttgaaatagtcttgaatcctctgggcgttccatcg
cgtatgaacataggacaggtgctagaagtccaccttggacttgcagccaagaagctggga
tggcatgtggcaactccggtattcgacggagcaaacgagaaggacattgaaatagcgctt
gaacaagccgggtatccgcaggacggaaagcttatgctgcgtgacggacgtacgggagag
cctttcgataacagggtaacagttggatacatgtacatgctgaaactccaccaccttgta
gacgacaagatacacgccagatctacaggaccatactcgcttgtaacccagcagccgctt
ggcggaaaggcgcagtttggaggacagagattcggagagatggaggtttgggctcttgag
gcatacggagctgcacatactcttcaggagatccttacagttaaatcagatgacgtcgta
ggacgtgtgaagacatacgaagccatagtcaaaggggagaacatccctgagcctggaatt
cctgaatctttcaaggttcttataaaggagcttcagagtctttgcctcgatgttaaagtt
cttgaggctgaccaggagatagaaatcaaagagtctatagatgatgaagaaatctctatg
gaaggcgaatttgaatatgtgcgtgatgttaatcttgaagaaaccatggtaatagaagaa
ggcgaacaagaagaagacttagaagaagacttagaagaagacgctgacgaatttgaagat
gatgacctggaccaagaatttttcaaggctgacattgaagaagaagatgatgatgagttt
taa
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