Equus asinus (ass): 106822201
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Entry
106822201 CDS
T04645
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
eai
Equus asinus (ass)
Pathway
eai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106822201 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106822201 (CNOT1)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106822201 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106822201 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106822201
NCBI-ProteinID:
XP_014682745
UniProt:
A0A8C4LUR2
LinkDB
All DBs
Position
28:complement(37641364..37755131)
Genome browser
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPAITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggc
cctgaggcagacaggcatttactacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagacccagtttctgattcaggagtgtgcgtca
ctgattacaaagccaaactttatctcgacgctgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctgagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggtttcgctgcccagtttatcaaacagaagcttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatattgcaatagaggtc
ctacacctcctcctctcccatctcctttttgggcagaagggagcctttggagttggacag
gaacagatagacgcttttcttaagacgctgcgcagagattttcctcaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcaattt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggcacgaact
cattcaggattaacagacggaattcctttacagagtatctctgctcctggcagtggtatt
tggagtgatggaaaagataaaagtgatggagcacaggcacacacatggaatgtagaagtg
ttgattgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtctgggtatggaagtattcccagtagacctcatatatagaccttggaaa
catgctgaaggccagctctccttcattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgccactgatattctgaaagcaccaccagaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctaagactc
gcagaggtgggtcaatatgaacaagtcaaacagctcttcagcttccctatcaaacactgt
ccagatatgctggtattggccttactacaaatcaacacctcctggcacacgttgcgccat
gaactcatctccactttgatgccaattttccttggaaaccatcctaactctgctattatt
ttgcactatgcatggcatgggcagggtcagtctccctcaatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggggagcagtatgaccaggccaaattgtctcgaata
cttgatgtggcccaagacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgcgaatacctcaaacttgataagtgg
ctcacagataaaattcgagaacatggagagccttttatccaggcatgtatgactttttta
aagagacggtgcccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccagaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggagttatcagaaaccatcctcaccatggtagccaattgtagtaatgtt
atgaacaaggccagacaaccgccacctggagttatgccaaaaggacgccctcctagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaactgcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggctcttggactccctgcagtgaat
aacgatccttttgtacagaggaaattgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcatccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaactgtatgctaaggaacttgtttgaagaatatcgg
tttttcccccagtaccctgataaagagttacatataacagcctgcctgtttggtgggata
atcgaaaaaggactagtcacttacatggcactaggtctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattatttcggaattgctgcactagataga
tttaaaaatagattgaaggactacccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatatcgagtatggacagcagtctagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggca
caggctcaggcccaggttccagcaaaagctccccttgcgggtcaggttagcactatggta
accacctcgacaaccaccactgttgctaaaacggttacagtcaccaggccaaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacattgcttgtg
gccacagatcaaactgagagaattgtagagcccccagaaaatatccaggagaaaattgct
tttatcttcaacaatctctcccagtcaaatatgacacaaaaggttgaagaactaaaagaa
actgtgaaggaagaatttatgccttgggtttcacaatacttggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacgttgaagaatcctgaa
tttaataagatggttctgaatgagacttacagaaacatcaaagttctcctgacctccgat
aaagctgcagccaatttctcggatcgttctttgctgaagaacttgggacattggctagga
atgattacactagctaaaaataaacccatcttacacactgacttggatgtaaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctatgtggtgccctttgttgcc
aaagtcttagagtctagcattcgtagtgtggtttttaggccacccaacccctggacaatg
gcaattatgaatgtattagccgagcttcatcaggaacatgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaatgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcaactctctgctccaaaa
aaagatgtcaagcagccagaagaactccctgccatcacaaccacaacaacttctacaaca
ccagctaccagtaccacatgtacagccacggttccaccacagccacagtatagctaccac
gacatcaatgtctattctcttgcaggcctggcaccacacattactctaaacccaacaatt
cccttgtttcaggcccatccacagctgaagcagtgtgtgcgccaagcaattgaacgggct
gtccaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gagcaaatagtcaggaaggattttgctctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacttgcagggaacct
ttgctcatgagcatatccaccaacctgaaaaacagttttgcctcagcccttcgtactgca
tctccacaacaaagggaaatgatggatcaggcggctgctcagttagctcaggacaattgt
gaattagcttgctgctttattcagaagactgcagtagaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaaggacgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagagcaaatcaggctgaaa
gttggtggtgtggacccaaagcagctggctgtttatgaagagtttgcacggaatgtgcct
gggtttttgcctacaaacgatttaagtcagcccacaggatttttagctcagcccatgaag
caagcttgggcaacagatgatgtagctcagatttatgataagtgcattacagaactggag
cagcacctacatgccatcccaccaactttggccatgaaccctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgagatgctatagctgctcttgga
ttgctccagaaggcggtagagggcttactagatgccacaagtggtgctgatgctgaccta
ctgttgcgctatagggagtgccatctcttggtcctaaaagctcttcaagatggccgggct
tatgggtctccatggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataagtataatgtggaggcagtggagttgctaattcgcaatcatttggttaacatgcag
cagtatgatcttcacctagctcagtcgatggagaatggtttaaactacatggccgtggca
tttgctatgcaattggtaaaaatcctcctggtggatgaaaggagtgttgcccatgttact
gaggcagatctgttccacaccattgaaaccctcatgaggattaatgcgcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcaccagcaaggaatcctgaaaactgatgac
ctcataacaaggttctttcgtctctgtactgaaatgtgtgttgaaatcagttatcgtgct
caggcagagcagcagcacaatcctgctgctaatcccactatgattcgagccaagtgctat
cacaacctggatgcctttgtccgactcattgcactgctagtgaagcactcaggggaggcc
accaatactgtcacaaagatcaatctgctgaacaaggtccttgggatagtagtgggagtt
ctcctgcaggatcatgatgttcggcagagtgaatttcagcagcttccctaccatcgaatt
tttattatgctgctcttggaactcaatgcacctgagcatgtattggagaccattaatttc
cagacactgacagctttctgcaatacattccacatcttgaggcctaccaaagctcctggc
tttgtgtatgcctggcttgagctgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcgcctttccttagaaatgtggagctcaccaaacctatgcaaatcctctataag
ggcactttaagagtgctgctggttcttttgcatgatttccctgagttcctttgtgattac
cattatggattctgtgatgtgatcccacccaattgtatccagctaagaaatctgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgaaattaacattgcaccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcgatcacctgtcacttttctc
tctgatctgcgcagcaacctccaggtatccaacgagcctggtaatcgctacaacctccag
ctcatcaacgcactggtgctctatgtagggactcaggccattgcacacatccataacaag
ggcagcacaccttcaatgagcacgatcacgcactcagctcacatggacatatttcagaat
ctggctgtggacttggacactgaaggtcggtatctcttcttgaatgcaattgcaaatcag
ctgcggtacccaaatagccacactcactacttcagctgtaccatgctgtacctttttgca
gaggccaatactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtcttcttattaccttcattgagctgattaaaaatcca
gcgtttaagttctggaaccacgagtttgtacattgtgccccagaaattgaaaagttattc
caatcggtcgcacaatgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
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integrated database retrieval system
