Exiguobacterium alkaliphilum: KB235_00425
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Entry
KB235_00425 CDS
T07307
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
eap
Exiguobacterium alkaliphilum
Pathway
eap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KB235_00425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eap03400
]
KB235_00425
Enzymes [BR:
eap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KB235_00425
DNA repair and recombination proteins [BR:
eap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KB235_00425
Prokaryotic type
KB235_00425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QUE86441
LinkDB
All DBs
Position
complement(75330..76007)
Genome browser
AA seq
225 aa
AA seq
DB search
MGEQLSDRLLGDWSHLIESEMEETYFQALKTFVDEAYNTTTVYPARQDIWNAFVYTKFKD
VKCVILGQDPYHGPNQAHGLSFSVQDGVRFPPSLRNIFQELADDIGCTPPKSGNLEKWAR
QGVLLLNTALTVEAGKAGSHRGQGWETFTDTIIRELGNREQPIVFILWGNDAKKKQTLIG
EQHLILTSVHPSPLSAHRGFFGSKPFSQVNAKLSEWGVEEIDWCL
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggagaacaattatcagaccgcctgctcggggactggtcacatttgattgaatccgag
atggaggagacatattttcaagcgttgaagacgttcgtcgacgaggcgtataacacgacg
acggtctatccggcgcgccaagacatttggaacgcgttcgtctacacgaagttcaaggac
gtcaagtgcgtcattctcggacaagatccgtatcatggcccgaatcaggcgcacggcctc
agcttttcggtacaggacggcgttcgtttcccaccatcgcttcgaaacatcttccaagag
ctggccgatgacatcggttgtacaccaccgaagagtgggaaccttgagaagtgggcgcgc
cagggcgtattgctcctcaatacggcgctcaccgtcgaggcgggcaaagccggttcacac
cggggtcaaggatgggaaacgttcaccgacacgattatccgagagcttggcaatcgagag
caaccaatcgtttttattctttggggtaacgatgccaagaaaaaacagacgctcatcggt
gagcagcacttaattttgacatcggtccatccgagcccgctctcggcccaccgcggcttc
tttggttcaaagccattctcgcaagtgaatgcgaagctcagtgaatggggcgtcgaagaa
atcgattggtgtttatga
DBGET
integrated database retrieval system
