Entomomonas asaccharolytica: JHT90_13355
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Entry
JHT90_13355 CDS
T08664
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eaz
Entomomonas asaccharolytica
Pathway
eaz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eaz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JHT90_13355 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaz03021
]
JHT90_13355 (rpoB)
03400 DNA repair and recombination proteins [BR:
eaz03400
]
JHT90_13355 (rpoB)
Enzymes [BR:
eaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JHT90_13355 (rpoB)
Transcription machinery [BR:
eaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JHT90_13355 (rpoB)
DNA repair and recombination proteins [BR:
eaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JHT90_13355 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
QQP87227
UniProt:
A0A974NIV8
LinkDB
All DBs
Position
complement(2877408..2881478)
Genome browser
AA seq
1356 aa
AA seq
DB search
MAYSYTEKKRIRKDFSKLPDVMDVPYLLAIQLDSYKEFLQKGVSKEQLRDKGLHAAFKSV
FPILSNSGSAALEYVGYRFSEPAFDVKECILRGITYAVPLRVKVRLIIFDRESSNKAIKD
IKEQEVYMGEVPLMTDNGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLYSARI
IPYRGSWLDFEFDPKDQVFVRIDRRRKLPVSVLLRALNYTTEEILNEFYDTNIFNVKDDH
LTLELVASRLRGEIAAFDIRDEKGKVIVEQGRRITARHINLLEKAGITELEVSLEYILGR
TLAHDVADPATGEIIAECNTEITQELLSKLVKVGVQRIETIYTNDIDCGPFISDTLKNDS
TSNQLEALVEIYRMMRPGEPPTKDAAENLFGNLFFSPERYDLSTVGRMKFNRRIGREEIE
GSGVLSKEDIIDVLKTLVAIRNGKGTVDDIDHLGNRRVRCVGEMAENQFRVGLVRVERAV
KERLSMAESEGLMPQDLINAKPVAAAIKEFFGASQLSQFMDQNNPLSEITHKRRVSALGP
GGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAAYARTNEYGFLESPYRVVK
NAKVTDEIVYLSAIEEADHVIAQASAKLEKGKLVEELVAVRHMNEFTVKAPEDVTLMDVS
PKQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLLADKPLVGTGMERYVARDSGVCV
VATRGGVIDSVDASSIVVRVANDEVETGEAGVDIYNLTKYTRSNQNTCINQTPLVQKGDV
VARGDILADGPSTDMGELALGQNMRVAFMPWNGYNFEDSILLSERVVQEDRFTTIHIQEL
TCVSRDTKLGPEEITSDIPNVGEMALNKLDESGIVYVGAEVQPGDILVGKVTPKGETQLT
PEEKLLRAIFGEKASDVKDTSLRVPTATKGTVIDVQVFTREGVERDARALAIEKSQLDAI
RKDLNEEFRIVETATFERLSAALVGNKADGGAGLKKGTALTQEILDDIEHGQWFKIRMAD
DALNEQLEKAQAYLADRRKLLDEKFEDKKRKLQQGDDLAPGVLKIVKVYLAVKRRIQPGD
KMAGRHGNKGVVSVIMPVEDMPYDENGEPVDIVLNPLGVPSRMNVGQILETHLGLAAKGL
GVKINRMLEEQRKVAEMREFLNEIYNEIGGRQENIDELTDQEVINLANNLRKGVPMATAV
FDGAKETEIKAMLKLADMPESGQMRLYNGRTGDAFERPVTVGYMYMLKLNHLVDDKMHAR
STGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYK
NIVDGNHTMEAGMPESFNVLIKEIRSLGIDIELETE
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggcttactcttatactgaaaaaaaacgtatccgcaaagattttagtaagttgccggat
gttatggatgtaccctatttactagctattcagttagattcctataaagaattcttacag
aaaggcgttagtaaagagcaactccgtgataaagggttacatgcagcttttaaatccgtc
tttccaattctcagcaattcaggcagtgctgccctagaatatgtgggctaccgctttagc
gagccagcatttgatgttaaagaatgtattttacgtggcattacctatgcagtaccttta
cgtgtaaaagttcgtttaattattttcgatcgtgaatcatctaataaagcgattaaagat
attaaagaacaagaagtctatatgggcgaagtgcctttaatgactgataatggtactttt
attattaatggtactgagcgggtaattgtatctcaattacaccgtagtccaggtgtattc
ttcgaccatgatcgtggaaaaacacatagttcaggtaagttattatattcagcgcgtatt
attccttaccgtggttcatggttagattttgaatttgacccgaaagaccaagtatttgtt
cgtatagatcgccgtcgtaaattacctgtttcagtattattgcgtgctttaaactataca
acagaagaaattcttaacgagttctatgacactaatatctttaatgttaaagatgatcat
ttaacattagagctagttgcttcacgtttacgtggtgaaattgctgcatttgatattcgt
gatgagaaaggtaaagtaattgttgaacaaggccgtcggattactgctcgtcatattaat
ttattagaaaaagctggcattactgagcttgaagtatcattagagtatattcttggtcgt
actttagcccacgatgtggcagatccagcaacgggtgaaatcattgctgaatgtaatact
gaaattacccaagagttactgtctaaattggtaaaagtaggcgtacaacgtattgaaacg
atttacaccaatgatattgattgcggtccatttatttcagatactttgaaaaatgatagt
accagcaatcaattagaagcgttagttgaaatttaccgcatgatgcgtcctggcgaaccg
ccaaccaaggatgcagcagaaaacttatttggtaatttattcttctcgccagagcgttat
gacttatcaactgtgggtcggatgaagtttaatcgtcgtattggacgagaagaaattgaa
ggttctggtgtattaagtaaagaagatattattgatgttctaaaaaccttagtagctatc
cgtaacggtaaaggcactgtggacgatattgaccacttaggtaatcgtcgtgtacgttgt
gttggtgaaatggctgaaaaccaattccgtgttggtttagtacgtgttgaacgtgcagtt
aaagaacgtctctcaatggcagaaagtgaaggcttaatgccgcaagatttaattaatgct
aaaccagtggctgctgctattaaagaattctttggtgctagccagttatcacagtttatg
gatcaaaataatccattatctgagattacccataagcgccgtgtttcagcattaggccca
ggtggtttaactcgtgagcgtgctggcttcgaagtccgtgacgtacatccaactcattat
ggtcgtgtatgtcctattgaaacacctgaaggtccaaatattggtttgattaactcatta
gctgcttatgcgcgtactaacgaatatggttttttagagagtccatatcgtgtggttaaa
aatgccaaagtaacggatgaaattgtttacttatctgcgattgaagaagctgatcatgtg
attgctcaggctagtgctaaattagaaaaaggcaaactggttgaagaattagtagctgtt
cgtcatatgaacgaatttactgttaaggcacctgaagatgtgactctaatggatgtatca
cctaaacaggtggtatctgtagctgcttctttaattccgttccttgagcatgacgatgcg
aaccgtgctttgatgggttctaacatgcaacgtcaagcggtacctactttattagcggat
aaaccgttagtgggaacaggtatggagcgttatgtcgctcgtgactcaggtgtgtgtgtg
gttgcaactcgtggtggtgtgatcgactcagtagacgcaagtagtattgtggtacgtgtt
gctaatgatgaggtggaaacaggtgaagcaggggttgatatttacaacctaactaagtac
acccgttctaatcaaaatacctgtattaaccaaacacctttagtacaaaaaggtgatgta
gttgcacgtggtgatattttggcagatggtccttctactgatatgggtgagttggcactt
ggtcaaaatatgcgtgtggcgtttatgccttggaatggttataacttcgaagactcgatt
ttattatctgagcgcgtagtacaagaagatcgtttcactactatccatattcaagagtta
acttgtgtatctcgtgatactaagcttggcccagaagagattacatcagatattcctaac
gtaggtgaaatggctcttaataagttagatgagtcaggtattgtttacgtaggtgctgaa
gttcaaccaggtgatattttagtaggtaaagtaacccctaaaggtgaaactcaattaacg
ccagaagaaaagctattacgtgctatctttggtgaaaaagccagtgatgtaaaagatact
tcattacgtgtacctactgcaactaaaggtacagtaatcgatgtacaggtatttacccgt
gaaggtgtagagcgtgatgcgcgtgctttagcgattgaaaaatctcagttagacgctatt
cgtaaagatttaaatgaagaattccgtatcgttgaaacggctacttttgaacggttaagt
gcagccttagtaggtaataaagctgatggtggtgcaggccttaagaaaggtacagcatta
acccaagagattcttgatgatattgaacatggtcaatggttcaagattcgtatggctgat
gatgcacttaatgagcaattggaaaaagcacaagcttatctggctgatcgtcgtaagttg
ttagatgagaagtttgaagataagaaacgcaaactacaacaaggtgatgatttagcacca
ggtgttttaaaaattgttaaagtttacttagcggttaaacgtcgtatacagcctggtgat
aagatggctggtcgtcatggtaataagggtgtggtatcagtcatcatgcctgtagaagat
atgccatatgatgaaaacggtgagccagtggatatcgtattaaacccactcggtgtacct
tcacgtatgaacgtgggacaaattctagaaacccatttgggtttagcagctaaaggttta
ggcgttaagatcaatcgcatgttagaagaacagcgtaaagttgctgaaatgcgtgagttc
ttaaatgagatctataacgaaataggtggtcgtcaagaaaatattgatgaattaaccgat
caagaagttattaatctagccaacaacttacgtaaaggtgttcctatggctaccgcggta
ttcgatggtgccaaggaaacagaaatcaaggcaatgttgaaactagcagatatgcctgag
tcgggtcaaatgcgtttatacaacggccgtactggtgatgctttcgagcgcccagtaact
gtaggttatatgtacatgttgaaactcaaccacttagtggatgataagatgcatgctcgt
tctacaggttcttacagccttgtaacgcaacagcctttaggtggtaaagcacaatttggt
ggtcagcggttcggtgagatggaagtgtgggcattagaagcatatggtgccgcttacacc
ttacaagaaatgttgactgtgaagtcggatgatgtgaacggtcgtactaagatgtataaa
aacatcgtggatggtaatcatacaatggaagctggtatgccagaatcctttaatgtattg
attaaagaaatccgttcactcggtatcgatatcgaactagaaactgaataa
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integrated database retrieval system
