Endosymbiont of Bathymodiolus septemdierum: BSEPE_0147
Help
Entry
BSEPE_0147 CDS
T04606
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSEPE_0147 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_0147 (xthA)
Enzymes [BR:
ebh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BSEPE_0147 (xthA)
DNA repair and recombination proteins [BR:
ebh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSEPE_0147 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
NagA_C
Motif
Other DBs
NCBI-ProteinID:
BAS67171
UniProt:
A0A0P0UQB0
LinkDB
All DBs
Position
complement(157349..158116)
Genome browser
AA seq
255 aa
AA seq
DB search
MKIITVNVNGIRAAEKKGFFDWLKKEDAEVVCLQEIKAQEDQLDERFYPKEYHCYYHPAE
KKGYSGTAIFSKKKPNLVVKKTDWEDMNFEGRIIQADFDDLSVVSIYIHSGSSKQERQDL
KMAFLTQRFMPHLKQLKANGKKVIFCGDVNIVHQKRDIKNFTGNKNRSGCLPEERAYLDE
LFDKVGFIDAFREINQEDGQYTWWSNRGQAWANNTGWRIDYQILTPNLKGTVKNTQIYKD
QRFSDHAPLIMEYKF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattataacagtcaatgtcaatggaattagagcagctgaaaaaaaaggttttttt
gattggttgaaaaaagaagatgcagaagtggtgtgcttgcaagaaatcaaagcacaagaa
gaccaattagacgaacgcttctaccctaaagaataccactgttattaccaccctgccgag
aaaaaaggctattctggtactgcaatttttagcaagaaaaaacccaacttggtcgtcaaa
aaaaccgattgggaagatatgaattttgaaggtcgaattattcaagccgattttgatgat
ttatccgtggtgtctatttatatccactcaggtagctctaagcaagaaagacaagattta
aaaatggcgtttttaacgcaacgctttatgcctcaccttaagcaattaaaagccaatgga
aaaaaagtcatcttctgcggcgatgttaacatcgtccatcaaaaacgcgacataaaaaac
ttcactggcaacaaaaatcgctcaggctgcctcccagaagaacgcgcctatctcgacgaa
ttattcgataaagttggcttcattgacgcctttcgtgaaatcaaccaagaagatggacaa
tacacctggtggagcaaccgtgggcaagcctgggcaaacaacactggctggcgcattgac
taccaaattcttacgccaaaccttaaaggcacggttaaaaatacccaaatttataaagac
caacgcttttcagatcatgcgccactgattatggaatataaattttaa
DBGET
integrated database retrieval system