Endosymbiont of Bathymodiolus septemdierum: BSEPE_1228
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Entry
BSEPE_1228 CDS
T04606
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh00541
Biosynthesis of various nucleotide sugars
ebh01100
Metabolic pathways
ebh01250
Biosynthesis of nucleotide sugars
Module
ebh_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BSEPE_1228 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ebh01005
]
BSEPE_1228 (kdsB)
Enzymes [BR:
ebh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
BSEPE_1228 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
ebh01005
]
Lipid A
BSEPE_1228 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
IspD
Formin_GBD_N
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
BAS68214
UniProt:
A0A0P0USX5
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All DBs
Position
complement(1190637..1191371)
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AA seq
244 aa
AA seq
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MGFSVIIPARYASSRLSAKLVQDIHGKPLIQHTYENAIKSGADSVIIATDNTIIEEISRN
FGATTCMTSKVHTSGTGRIAEVLETLNINDEQIIVNVQGDEPMLDAQVIKQVAQNLADSQ
MQMATLCENVIDKAQYLDPDCVKVVFDKFGKALYFSRSPIPAFRDEVDFDASLCFKHIGI
YAYRCGFIKQYLTMDSSRYEQVEKLEQLTVLNEGFGIHVSKACAPTGFGVDTAEDLEKVR
EALK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttcagtcattattcctgcgcgctatgcttcaagtcgtttgagtgcaaaattg
gtgcaagacatccacggcaaacccctgattcaacacacttacgaaaatgccattaaaagt
ggtgcagatagtgtcataatagcgacagataacaccataatcgaagaaatttcaagaaat
tttggtgctaccacttgtatgactagcaaagtccatacttcaggcacagggcgcattgct
gaagtgttagagaccttaaatattaatgatgagcaaattattgttaatgtgcaaggtgat
gagccgatgttggatgcgcaagtgattaaacaagtggcacaaaatttagccgattcacaa
atgcaaatggcaactttgtgtgagaatgttattgataaggcgcaatatttagacccagat
tgtgtgaaagtggtgtttgataaattcggcaaagctttgtatttttcgcgctcaccaatt
cccgcatttcgtgatgaggttgattttgatgcatcattgtgcttcaaacatattggtatt
tatgcgtatcgctgtggatttatcaaacaatatttaaccatggacagttcgcgttatgaa
caagtagaaaaattagaacaactcacggtactgaatgagggctttggtattcatgtgagt
aaagcctgtgctccaacagggtttggtgtggatacagcagaagatttagaaaaagtaaga
gaggcgctgaaatga
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