Intestinibaculum porci: SG0102_25510
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Entry
SG0102_25510 CDS
T05736
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm00300
Lysine biosynthesis
ebm00470
D-Amino acid metabolism
ebm01100
Metabolic pathways
ebm01110
Biosynthesis of secondary metabolites
ebm01120
Microbial metabolism in diverse environments
ebm01230
Biosynthesis of amino acids
Module
ebm_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SG0102_25510 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SG0102_25510 (dapF)
Enzymes [BR:
ebm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SG0102_25510 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Draxin
Motif
Other DBs
NCBI-ProteinID:
BBH27617
UniProt:
A0A3G9J8W0
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Position
complement(2710042..2710881)
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AA seq
279 aa
AA seq
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MLQFTKMEGIGNDYVYMDGIHQRVPMDATFISKISDRHFGIGSDGLIVILESEVADFKMR
MFNLDGSEGKMCGNGIRCFAKFVYDEHLTKKTTLQIETLSGIKTCELKIENGEVTSVTVD
MGKPVTTCREIPVVYDQEEMIDDELVINGIKYRGTAVSMGNPHLVIYRDNLDFNLEKIGP
HFEKDPMFPESVNTEFVQVIDEKHLKMRVWERGSGETHACGTGACAVMYASYLNHLCGPE
ADVELLGGHLQIAYRDGHIFMTGPARTTFRGYIQEEDYR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaatttaccaagatggaaggcattggcaatgattacgtctacatggacggaatt
catcagcgcgtgccgatggatgcaacttttatttccaaaatcagtgatcgccatttcggc
attggttccgatggtttaattgtgattttagagagtgaagtggcagattttaaaatgcgc
atgttcaatttagacggcagtgaaggcaagatgtgcggtaatggtatccgctgttttgca
aagtttgtctatgatgaacacttaaccaagaaaacaactttacaaatcgaaactttaagt
ggcattaaaacatgtgaactgaagatcgaaaatggtgaagtcactagcgtcactgtcgac
atgggaaaaccggtgacgacctgtcgagagattccagtcgtctatgatcaggaagaaatg
attgatgacgaacttgtcatcaacgggatcaagtaccgtggaaccgctgtttcgatgggc
aatcctcatctcgttatttaccgtgataatctggatttcaatttagaaaagatcggacct
cattttgaaaaggatccgatgttcccagagagcgtaaatactgaatttgtgcaagtgatt
gatgaaaagcatctgaagatgcgtgtgtgggaacgcggcagcggagaaacccatgcctgc
ggcacgggggcctgcgcggtcatgtatgccagctatctgaatcacttatgtggtccagag
gcggatgttgaattattaggcggtcatttacagattgcttatcgtgatggtcatattttt
atgaccggaccagcccgcaccacatttagagggtatatacaggaggaagattacagatga
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