Escherichia coli B REL606: ECB_01718
Help
Entry
ECB_01718 CDS
T00944
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ebr
Escherichia coli B REL606
Pathway
ebr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECB_01718 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebr03400
]
ECB_01718 (xthA)
Enzymes [BR:
ebr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ECB_01718 (xthA)
DNA repair and recombination proteins [BR:
ebr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ECB_01718 (xthA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
ACT39380
LinkDB
All DBs
Position
1809693..1810499
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI
KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC
CVETGIDYEIRSMEKPSDHAPVWATFRR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaacggcctgcgcgccagacctcaccagcttgaagcc
atcgtcgaaaagcaccaaccggatgtgattggcctgcaggagacaaaagttcatgacgat
atgtttccgctcgaagaggtggcgaagctcggctacaacgtgttttatcacgggcagaaa
ggccattatggcgtggcgctgctgaccaaagagacgccgattgccgtacgtcgcggcttt
cccggtgacgacgaagaggcgcagcggcggattattatggcggaaatcccctcactgctg
ggtaatgtcaccgtgatcaacggttacttcccgcagggtgaaagccgcgaccatccgata
aaattcccggcaaaagcgcagttttatcagaatctgcaaaactacctggaaaccgaactc
aaacgtgataatccggtactgattatgggcgatatgaatatcagccctacagatctggat
atcggcattggcgaagaaaaccgtaagcgctggctgcgtaccggtaaatgctctttcctg
ccggaagagcgcgaatggatggacaggctgatgagctgggggttggtcgataccttccgc
catgctaatccgcaaacagcagatcgtttctcatggtttgattaccgctcaaaaggtttt
gacgataaccgtggtctgcgcatcgacctgctgctcgccagccaaccgctggcagaatgt
tgcgtagaaaccggcatcgactatgaaattcgcagcatggaaaaaccgtccgatcacgcc
cccgtctgggcgaccttccgccgctaa
DBGET
integrated database retrieval system