KEGG   Empedobacter brevis: F0358_12915
Entry
F0358_12915       CDS       T06196                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ebv  Empedobacter brevis
Pathway
ebv02024  Quorum sensing
ebv03060  Protein export
ebv03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ebv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    F0358_12915
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    F0358_12915
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    F0358_12915
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ebv02044]
    F0358_12915
Enzymes [BR:ebv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     F0358_12915
Secretion system [BR:ebv02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   F0358_12915
  Eukaryotic Sec-SRP protein
   F0358_12915
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 ATPase CbiA AAA_17 APS_kinase SRPRB AAA_18 AAA_31 AAA_30 AAA_33 KTI12 Fe-ADH FtsK_SpoIIIE T2SSE DnaB_C AAA_14 AAA_16 cobW 6PF2K AAA_24 ATPase_2 KAP_NTPase Cytidylate_kin ArsA_ATPase nSTAND3 ATP_bind_1 ResIII nSTAND_NTPase5 Fe-ADH_2 NACHT PRK DO-GTPase1 SLFN-g3_helicase NPHP3_N TsaE AAA_28 MMR_HSR1 AAA_19 AAA_23 Thymidylate_kin
Other DBs
NCBI-ProteinID: QES93556
LinkDB
Position
complement(2727942..2729303)
AA seq 453 aa
MFQNLQDKLDKALHTLKGKGQITEINVAETVKEVRRALVDADVSYKVAKDFTNTVKEKAL
GENVITSLNPGQLMVKIVHDELAKLMGGEVVELQIEANPTIILIAGLQGSGKTTFSGKLA
NFLKTKKNKKVLLVAGDVYRPAAINQLQVLGEQIGVDVYADLENKNPVEIAQAAIAQAKQ
NGNNVIIVDTAGRLAIDEQMMDEIRRVHQTVNPTETLFVVDSMTGQDAVNTAKAFNEVLN
YNGVVLTKLDGDTRGGAALTIRTVVDKPIKFISTGEKMEALDVFYPERMADRILGMGDVV
SLVERAQEQFDEEEAKRLQKKIAKNSFDFDDFLKQIQQIKRMGNMKDLVGMIPGAGKALK
DVEIDDNAFKGVEAIIHSMTKKERQNPTIIDNSRKKRIAAGSGTSLQEVNQLLKQFSEMG
KMMKFMNSSNGKKMMETMSKNMPAGGFPGMPKM
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttcaaaatcttcaggataaattagataaagcactacatactttaaaaggaaaagga
caaattactgaaattaatgttgcagaaacagtaaaagaggtgcgtagagcacttgttgat
gccgatgttagttataaagttgctaaagattttacaaatactgtaaaagaaaaggcttta
ggagaaaacgtaatcacatctctgaatcctggacaattaatggtaaaaattgttcacgat
gaattagcaaaattaatgggaggtgaggtagtagaacttcaaatagaagcgaatcctaca
attattttgattgctggtttacaaggttccggtaaaacaactttttccggaaaattagct
aatttccttaaaacgaagaaaaataaaaaagtattgctagttgcaggtgacgtttatcgc
ccggccgctatcaatcaattgcaggttttaggagagcaaattggtgttgatgtatatgct
gatttagaaaataaaaatcctgttgaaattgctcaagcagcgattgctcaagcaaaacaa
aatggaaacaatgtcattatagtcgatactgctggtcgtttagcaattgatgagcaaatg
atggatgaaattcgccgcgttcatcaaactgtcaacccaaccgaaactttgtttgttgtc
gattctatgactgggcaagatgcggtaaatactgcaaaagcattcaacgaagttttaaat
tacaatggggttgtacttacaaaattagatggagatactcgtggtggagctgctttaacg
attagaactgttgtcgataaaccaattaagtttatctcgactggtgaaaagatggaagct
ttagatgttttctatccagagcgtatggcggatcgtattttgggaatgggagacgttgtt
tcgttagtagaacgcgctcaggaacaatttgacgaagaggaagcaaaacgtttacaaaag
aaaattgcgaaaaacagttttgatttcgacgatttcctaaaacaaatccagcagattaaa
cgtatgggtaatatgaaggatttggttggaatgattccaggtgccggaaaagcattaaaa
gatgtagaaattgatgacaatgcttttaaaggtgttgaagcaattatacattctatgacc
aaaaaagaacgtcagaatccaacgattatcgataattctcgtaagaaaagaattgctgcc
ggttctgggacttctttacaggaagtcaaccagctattgaaacaattctctgagatggga
aaaatgatgaaatttatgaattcttctaatggtaaaaagatgatggaaaccatgtctaaa
aatatgcctgccggaggattccccggaatgccaaagatgtaa

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