Erigeron canadensis (horseweed): 122579313
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Entry
122579313 CDS
T07610
Name
(RefSeq) probable arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00541
Biosynthesis of various nucleotide sugars
ecad01100
Metabolic pathways
ecad01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
122579313
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ecad01005
]
122579313
Enzymes [BR:
ecad01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
122579313
Lipopolysaccharide biosynthesis proteins [BR:
ecad01005
]
Lipid A
122579313
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
GAF_2
Motif
Other DBs
NCBI-GeneID:
122579313
NCBI-ProteinID:
XP_043607400
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All DBs
Position
8:complement(42170886..42176762)
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AA seq
339 aa
AA seq
DB search
MGSLSYSLSSEENQEQKIDPNKLKSLFKCQQKYLNNFFEKLDHNQTQKFAQTLLNTKGTI
FITGIGKSGFVSKNISQTLVSLGIKSQFLSPVDALHGDIGILTENDILIMFSKSGNTEEL
VKLVPCVKAKGAYLISITSVEGNVLMGMCDMNVHLPLERELCPFDLAPTTSTAIQMVFGC
TVAIAMMDAKNLTKEGYAANHPAGRIGKSLIFKVKDVMKKQNELPVCKEGDLIMDQLVEL
SSKGCGCLLVTDDDYHLIGTFTDGDLRRTLKASKEGIFKLSVGEMCNRKPRTITADRMAV
EAMAKMEAPPSPVQFLPVINEQNVVIGIVTLHGLVSAGL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggggtctctctcatattcattatcatcagaagaaaaccaagaacaaaaaatagatcca
aacaagctaaaatctttattcaaatgccaacaaaaatacctaaacaatttctttgagaaa
ctagaccataaccaaacacagaaattcgcccaaacactccttaacacaaaaggaacaatc
tttataacaggaattggcaaatccggatttgtatcaaaaaacatttctcaaacccttgtg
tctttaggcatcaaatcacaattcttgtcacctgttgatgcacttcatggagatataggc
atattaacagaaaatgatatattaataatgtttagcaaaagtggtaacacagaagagcta
gtgaaattggtgccttgtgttaaggcgaaaggcgcgtatttgatatcgataacatcggtt
gaagggaatgtgttgatgggaatgtgtgatatgaatgtgcatttgcctttagaaagggaa
ttgtgtccttttgatttggcaccaactacttctactgctatacaaatggtgtttggatgt
actgttgctattgctatgatggatgctaagaatttgactaaagaaggctatgctgctaat
catcctgctggtaggattggcaaaagtttgatctttaaggtgaaggatgtgatgaagaag
caaaatgagcttccagtatgtaaagaaggagacttgataatggatcaattagtggaacta
agtagcaaaggatgtggttgccttttggtgactgatgatgattaccatcttattgggacg
ttcactgacggtgatctgaggcgaacacttaaagctagcaaggagggcattttcaaactt
agtgttggtgaaatgtgcaacaggaagccaaggaccataactgcagacagaatggcggtt
gaggcaatggctaagatggaggctcccccatcccctgttcagtttttgccggttattaat
gaacaaaatgtcgttataggtattgtcacactccatgggctcgtatctgctggcctctga
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