Erigeron canadensis (horseweed): 122580105
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Entry
122580105 CDS
T07610
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122580105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122580105
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122580105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS_3
F-box-like
PAS
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
122580105
NCBI-ProteinID:
XP_043608314
LinkDB
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Position
8:complement(38329408..38332240)
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AA seq
650 aa
AA seq
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MGILAKEENDDVSADDVHLTKKLKYTAAQDDEQKKQLQLLEEEEEGYSCSDEEEDIDDDN
NDGFVLRLGEYFNPMIPTSIVVSDAMEPDLPIIYVNKVFESVTGYRADEVLGRNCRFLQY
RDPRAQRRHPLVDPVCVSEIRRCLNEGLDFQGELLNFRKDGTPMVNRLRLAPIHDDDGIV
THVIGIQVFTETKIDLNSVSYPVFKETCKNQSDQEVGKYSPKSGQIKYIECQEICGILQL
SDEVMAHNILSRLTPRDVASIGSVCRRIRQLTKNEHLRKMVCQNAWGREVTGALENMTHK
LGWGRLARELTTLEAVCWKKLRVGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTF
VLNLDAVNPEWRQVSVKSSPPGRWGHTLSCLNGSWLVVFGGCGKQGLLNDVFVLDLDAKQ
PTWIEVYGGGAPPPRSWHSSCTIEGSKLVVSGGCTDAGVLLNDTFLLDLTMKNPIWREIP
TSQVPPSRLGHSLSVYGRTKILMFGGLANSGHLRLRSSEVYTIDLVDEKPQWRLLECNAF
TGVGIQSAVVPPPRLDHVAMSMPCGRIIIFGGSIAGLHSPAQVFLLDPAEEKPSWRILNV
PGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNELHELCLASRQDVES
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggaatccttgctaaagaagaaaacgacgacgtttcagctgatgatgtccatctaaca
aaaaagctcaaatacacagcagctcaagatgatgaacaaaaaaaacaattacaactacta
gaagaagaagaagaaggttacagctgcagcgacgaagaagaagatattgacgatgataat
aatgatggatttgtgttaagattaggagagtattttaatccgatgattccgacgtcgata
gtggtttcagatgccatggaacccgatttacctattatttatgttaataaagtttttgaa
tccgtgaccggctaccgtgctgatgaagtcctcggccgcaactgtcgatttttgcagtac
cgagacccacgagcccaaagacggcatcctctggtggaccccgtttgtgtgtcggagatc
agaaggtgtctaaatgaaggccttgatttccagggagagcttcttaactttagaaaagac
ggtactccaatggtgaaccgactaagacttgctccgatacatgacgatgatggtatagtc
acacacgttatcggtattcaagtgtttacagaaacgaaaatcgatttaaatagtgtgtca
taccctgtttttaaagagacttgcaagaaccaatctgatcaggaggtgggtaagtattct
ccaaagagtggacaaataaagtatatagagtgccaggaaatatgtgggattcttcagctt
tctgatgaagtaatggctcacaacattttgtcacgtttgacgcctcgagatgttgcttcg
attggttctgtttgtagaaggatacgtcaacttacaaagaacgagcatttgaggaaaatg
gtgtgtcaaaatgcttgggggagagaagtgacaggtgcattagaaaacatgacgcataag
ttagggtggggtcgtctagctcgagaattaaccactcttgaagctgtttgttggaagaaa
cttagagtcggtggtgcggttgagccttcacgatgcaattttagtgcttgtgctgctggt
aaccgactagttttgtttggaggggaaggagttaatatgcagccgatggatgatactttt
gttctcaatcttgacgctgtgaatcctgagtggcgtcaggtgagtgtaaagtcttcccca
ccgggtcgttggggccacactctctcatgccttaacgggtcttggttagtggtttttggt
gggtgtggaaaacaagggttactcaacgatgtgtttgttcttgacctggatgccaagcaa
ccaacatggatagaagtctatggtggtggtgcgccgccacctaggtcttggcacagctca
tgcaccatagaagggtcaaaactagtggtttcaggtgggtgcaccgatgcaggagtcctt
ctaaacgacacatttttgcttgatctaactatgaaaaatcctatttggagagagattcca
acttcgcaggtccctccatctcgactaggccattcgttgtcagtttatggaaggaccaag
attcttatgtttggtgggcttgctaacagtggtcacttaaggttaagatcaagtgaggta
tacaccatagatctggtggatgagaagccgcaatggaggcttttggaatgcaatgcattt
acaggggtagggatccagagtgcggtggttccaccgcctaggcttgaccatgtagccatg
agtatgccatgtgggcgcataataatatttggaggttcaattgctgggctgcactctcct
gctcaggtgttcttgctggaccctgcagaggagaaaccgtcttggaggatactgaatgta
cctggtcaacccccaaaatttgcttggggtcatagtacttgtgtggttgggggtacaagg
gttcttgttttgggtggtcatacgggcgaagagtgggttcttaatgagttacatgaactg
tgcttggcaagcaggcaggatgtggagtcatga
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