Erigeron canadensis (horseweed): 122581440
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Entry
122581440 CDS
T07610
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00906
Carotenoid biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Module
ecad_M01040
Lutein biosynthesis, plants, lycopene => lutein
ecad_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122581440
Enzymes [BR:
ecad01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
122581440
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
Thi4
DAO
Pyr_redox
FAD_oxidored
HI0933_like
NAD_binding_8
Trp_halogenase
FAD_binding_2
Pyr_redox_3
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-GeneID:
122581440
NCBI-ProteinID:
XP_043609608
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Position
9:complement(1363588..1365361)
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AA seq
504 aa
AA seq
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MDTLLRTHSCFEFLHPVNRFAGNLNTFSTCKSQVHDFRFGPKKSNFKWGHKDYVKASSSA
LLELVPEIKKENLEFELPMYDSAKGLVVDLVVVGGGPSGLAVAQQVSEAGLTVCSIDPSP
KLIWPNNYGVWVDEFEAMDLLDCLDTTWSSAVVYINDNSTKSLNRPYARVNRKELKTKML
QKCITNGVKFHPAKVIKVIHEEFKSLLICNDGVTIQATLVLDATGFSRSLVQYDKPYNPG
YQVAYGILAEVEEHPFDVDKMLFMDWRDSHLNNNPEVKERNSKIPTFLYAMPFSSTRIFL
EETSLVARPGLKMEDIQERMVCRLKHLGIKVKSIEEDERCVIPMGGPLPLLPQRVLGIGG
TAGMVHPSTGYMVARTLAAAPIVAKSIIQYLNSEKLMLGTDLSAEIWRDLWPIERRRQRE
FFCFGMDILLKLDLEGTRRFFDAFFDLEPRYWHGFLSSRLFLPELLTFGLSLFAHASNTS
RIEIMAKGTLPLATMINNLVQDRE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgttaagaacacatagttgttttgaatttctacacccagttaatagattt
gcaggaaatttgaatacttttagtacatgtaagtctcaagttcatgactttagatttggc
cccaaaaaatcgaattttaaatggggacataaagattatgttaaggcaagcagtagtgct
cttttagagcttgttcctgaaatcaagaaagaaaatcttgaatttgagcttcctatgtat
gattccgcaaagggtcttgtggtggatttagtggtggttggtggtggtccttcgggctta
gctgttgctcaacaagtgtctgaggctgggcttactgtgtgctcgattgacccgtcccct
aagttgatttggcctaataattatggtgtttgggttgatgagtttgaggctatggatttg
ttagattgtttggatactacttggtcaagtgcggttgtttacattaatgataattcgaca
aagagtcttaatagaccttatgcgagggttaatagaaaagaacttaagacgaagatgtta
caaaagtgtataacaaacggagttaagtttcatccagcgaaagtaattaaagtcattcat
gaagaattcaaatctttgttgatttgcaacgatggtgtcacgattcaggcgacgttggtt
cttgatgctactggcttttcaagatcacttgttcagtatgacaagccttataatcccggg
taccaagtagcatatggtattctagctgaagtagaagaacacccttttgatgtcgataag
atgctcttcatggattggagagattcacatcttaataacaatcctgaagttaaagaaaga
aattcaaagattccaacttttctttacgcgatgccattttcatccactagaatatttctt
gaagaaacttcacttgtggctcgccctgggctaaaaatggaagatatacaagaaagaatg
gtgtgtcggttaaagcatttgggtataaaggtgaaaagcattgaggaagacgagcgttgt
gtgatcccaatgggtggcccgcttcccctgttacctcaaagagttcttggaataggtggc
acggcagggatggtgcatccttccactggatatatggttgcaagaactttagctgccgcc
ccaattgttgcaaaatcaataattcagtatctcaattctgaaaaattgatgctgggaact
gatttatcagcagaaatttggagggatttgtggccaatagagagaagacgacaacgagag
ttcttttgttttggtatggatatcttgcttaaactcgacttggaagggacaagaaggttt
tttgatgcgttttttgatttagaacctcgttattggcatgggtttctgtcatcaagattg
tttctgccagagttattgacattcgggctttctctttttgctcatgcttctaatacttct
aggatagagatcatggcaaaaggaactctgccattggcaaccatgatcaacaatttagtt
caagatcgagaatag
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