Erigeron canadensis (horseweed): 122582233
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Entry
122582233 CDS
T07610
Name
(RefSeq) polyubiquitin-like
KO
K08770
ubiquitin C
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122582233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122582233
Ubiquitin system [BR:
ecad04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122582233
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GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
TBK1_ULD
Rad60-SLD_2
Dsc3_N
DUF2604
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
122582233
NCBI-ProteinID:
XP_043610534
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Position
9:11896524..11898222
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AA seq
308 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGFWSI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgttaagactcttactggtaaaaccatcactctcgaagtcgagagctct
gacactatcgataatgttaaggcgaaaatccaagacaaagaagggatccccccagaccag
cagaggttgatctttgctggaaagcagctcgaggacggtcgtaccttggccgattacaac
attcaaaaggaatcaaccctccatcttgttctcaggttgaggggcggtatgcagatcttt
gttaagactctcacaggaaaaaccatcactttggaagtcgagagctctgacacaatcgat
aacgtcaaggctaagatccaggacaaagaaggtatccccccagaccagcagagattgatt
ttcgctggcaagcagcttgaggatggacgtacccttgctgattacaacattcagaaggag
tccacactgcatttggttctccgtctccgtggtggtatgcagatatttgtgaaaaccttg
acaggaaaaacaattactttggaggttgagagttcggataccattgacaacgtcaaggca
aagatccaagataaggaaggaatcccaccagaccagcagaggttgatttttgctggcaag
cagcttgaggacggacgtactttggctgattataacattcagaaggagtctaccctccat
ctggttcttcgtcttcgtggtggtatgcagatctttgttaaaaccttgacagggaaaacc
atcactttggaggtggaatcgtctgatactattgataatgtcaaggccaagattcaggat
aaggaggggatcccaccggaccagcagaggttgatatttgctggtaaacaactggaagat
ggtaggacgcttgccgattacaacattcagaaggagtccacccttcaccttgtgctccgt
cttcgtggtgggttttggagtatctaa
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