Erigeron canadensis (horseweed): 122583463
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Entry
122583463 CDS
T07610
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00040
Pentose and glucuronate interconversions
ecad01100
Metabolic pathways
Module
ecad_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122583463
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
122583463
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Peptidase_M15_2
NosD
Motif
Other DBs
NCBI-GeneID:
122583463
NCBI-ProteinID:
XP_043611799
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Position
9:complement(27423605..27425471)
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AA seq
390 aa
AA seq
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MNKQLLKAALIICIILSIMICCSNAASYNVVSYGARADGRTDSSKAFMNAWKAACASRSS
TMVYIPRGTYMTKPVVFSGPCRSRILFQIDGTIVAPPNYQDMGNTGFWILFSKVSRLTIH
GGTIDARGSKFWACRQTGSNCPAGVRSLSILWSNDVVITGLKSLYSELIHITVSDSNHIH
LEHMNIIAPSRSPNTDGIIIQSSSGVTIKNSMIRTGDDCIAVGPGSKNIWIEKIACGPGH
GISIGSLGNSLNEAGVQNVTVTNTVFKKTQNGVRIKSWARDSKSYATNVEFRNLIMQAVD
NPIIIDQTYCPDNRCPHQTSGVEVSNVKYSNIKGTSTTVEAVKFQCSVSNPCRGIQMRNI
RLTTPNRATTSICENVHGSNSGSVVPRSCF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcaacttctaaaagctgctttgatcatttgcattattttatcaatcatgata
tgttgtagtaatgcagcttcatacaatgtagttagttacggggctagagccgatggtcga
actgactcgagcaaagctttcatgaatgcatggaaggctgcttgtgcttcgagaagttcg
accatggtttatatccctagggggacttacatgactaaaccggtcgtgtttagtggacca
tgtagaagcaggatcttgtttcaaatagatggtaccattgttgcaccacctaattatcaa
gacatgggtaacaccgggttttggatattgttttctaaggtctcgaggttaaccattcat
ggcggaaccattgatgctagaggttctaagttttgggcttgtcgacagaccggtagtaat
tgtccggctggagtaaggtctttatcgatcttgtggtcgaacgatgttgtaattacggga
ctcaagtcattgtacagcgaattaattcacatcaccgtgagcgatagcaatcatatacat
ttagaacatatgaacattattgctcctagtcgtagcccgaatacagatggtatcattatt
cagtcatcttctggtgttaccatcaagaacagtatgatcaggactggggatgattgcatt
gcggtcgggcctggctccaaaaatatatggattgaaaaaattgcttgtggcccaggccat
ggtataagcataggaagcttggggaatagtttaaatgaagcgggagtgcaaaacgtgaca
gtgacaaacacggtgttcaagaaaacacaaaatggggtacggatcaaatcttgggcacgg
gatagcaagagctatgcaacaaatgtggaattcaggaaccttattatgcaggcagttgac
aacccgatcatcattgatcagacttactgcccagataatcgatgtccacatcagacatct
ggagtcgaagtaagcaatgtgaaatacagcaacataaaaggaacatcaactacagttgaa
gccgtgaagtttcaatgcagcgtgagcaatccgtgcagagggattcagatgcgtaacatc
agactaaccacaccaaatagagcaaccacttcaatatgtgaaaatgtgcatggttccaac
tcgggctcagtcgtcccacgaagctgtttctga
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