Erigeron canadensis (horseweed): 122585444
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Entry
122585444 CDS
T07610
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122585444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122585444
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122585444
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
122585444
NCBI-ProteinID:
XP_043613511
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All DBs
Position
1:complement(25056429..25059998)
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AA seq
329 aa
AA seq
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MVSESTSLSSFFDTSAEQFGGTKFLSAGVASPDDIFSILEALEGVSDEFPSLIDETSGGV
KDGGLVSQKSTSSSGMETISPKTKRQKVSPRGEEGGENSDGPLKMNHVTVERNRRKQMNE
HLTVLRSLMPCFYVKRGDQASIIGGVIDYITELQQVLQSLEAKKQRKIYTDVLSPRFISS
PRTIPLSPRKPPLSPRPTLPISPRTPQSASPYRHKLPSFMASTIPPASPCNSSSNSDTIN
ELVANSKSSFADVEVKFSGPNLVLKTLSPRLPGQATKIISVLEDLSLEILQATINIVDEK
MVNAFTIKIGIECKLSAEDLAQHIQLTFC
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcgagtccacttctttatcttctttttttgatacttctgccgagcaatttggt
ggaaccaaattcttgtcggcaggagttgcgtctccagacgacatctttagtattctcgag
gcgttagaaggtgtgtcagatgagttcccgtctttgatagatgagacgtctggtggtgtg
aaggatggtggtttggtgtcccagaaatcaacttcttcaagtggcatggagactatctca
ccgaaaactaagagacaaaaggtgtcgccacgaggagaagaaggcggtgaaaactcggat
ggacctttgaagatgaatcatgtcactgtcgagagaaaccggagaaaacaaatgaacgaa
cacttaaccgttcttcggtcactcatgccttgtttttatgttaaaaggggtgatcaagca
tcaatcattggaggagtgattgattacattactgaattacaacaagtgttacaatctcta
gaagcaaaaaagcaaagaaaaatctacactgatgttttaagccctaggttcatttcaagc
cctagaaccatacctctaagccctagaaaaccacctttgagcccgagaccgaccttaccg
ataagcccaagaacccctcagtcagcaagcccataccggcacaagttaccatcattcatg
gctagtactatcccaccagcctcaccttgtaactcttcatcaaattccgacaccatcaac
gagcttgttgcaaattcaaagtcatcctttgctgatgttgaggttaagttttcgggccct
aaccttgttttaaagactctatcaccgcggttaccaggccaagcgaccaagatcatttcg
gttcttgaagatttgtctcttgaaattcttcaggctacaatcaacattgttgatgaaaaa
atggttaatgcatttaccataaagattggaatcgaatgcaagttaagtgccgaggacctt
gcgcaacacattcagctcactttttgctag
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