Erigeron canadensis (horseweed): 122586848
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Entry
122586848 CDS
T07610
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122586848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecad03019
]
122586848
03012 Translation factors [BR:
ecad03012
]
122586848
Messenger RNA biogenesis [BR:
ecad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122586848
Translation factors [BR:
ecad03012
]
Eukaryotic type
Release factors
122586848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
122586848
NCBI-ProteinID:
XP_043614783
LinkDB
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Position
2:complement(1279030..1283218)
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AA seq
436 aa
AA seq
DB search
MSDAQETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTFDFEPFRPIN
ASLYLCDNKFHTEPLSELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALDMGAVEILIVWENLDISRYVLKNSATGEIIIKHLSKEQDNDQSNFRD
AETNAELEVQEKMSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGVLRYQLDI
RSFDELSDDGENYDTE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgctcaggaaactgataagaacattgaaatatggaagattaagaagcttata
aaagcacttgaagctgcaagaggaaatggaacaagcatgatttctctgattatgcctcca
cgtgatcaaatttcccgagtcacgaagatgcttggtgatgaatttggaactgcttcaaat
attaagagcagggtgaatcgtcagtctgttttaggtgccataacatctgcccagcaaagg
ctcaagctctacaataaggtccctcccaatggacttgtgctctacactggaacaatagtc
acagatgacgggaaagagaagaaggttacatttgacttcgaacctttcaggcctatcaat
gcatctctttatctctgtgataacaagttccacactgaacctctcagtgagctgttggaa
tctgatgacaagtttggctttatagttatggatggaaatggcactcttttcgggacgtta
agtggtaatactcgagaggttttgcacaagttcactgttgatttgcccaagaaacacgga
agaggagggcaatcagctcttcggtttgctcgtcttcgaatggaaaagcgtcacaattat
gttaggaagactgcagagcttgcaactcagttctacatcaaccctgctactagtcaaccg
aatgtttctgggcttatacttgctgggtctgctgatttcaaaaccgagctcagtcaatct
gatatgtttgaccaacgtcttcaggcaaaaatcttgaacgtggtcgatgtttcctatggg
ggtgaaaatggtttcaatcaggctattgagttgtctgctgaaattctggctaatgtgaag
ttcatacaagagaaacgtctaattgggaagtactttgaggaaataagtcaggatacagga
aaatatgtctttggtgtcgatgatactttgaaagctttggacatgggtgctgtggaaatc
ttgattgtttgggaaaatttggacattagccgatatgttctcaagaatagcgcaactggt
gaaatcattataaaacatttgagcaaggagcaagacaatgatcagagtaatttccgggat
gcagagactaatgctgagctggaagttcaggaaaagatgtcactgcttgagtggtttgcc
aacgagtacaaaaagtttggatgcacgcttgagtttgtcacaaataaatctcaagagggg
tcacagttttgtagaggttttggtggaattggcggcgttcttcgttaccagcttgacatt
cgttcatttgatgagctttctgatgatggggaaaattatgataccgaatag
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