KEGG   Erigeron canadensis (horseweed): 122587053
Entry
122587053         CDS       T07610                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122587053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ecad03041]
    122587053
Spliceosome [BR:ecad03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122587053
 Complex B
    122587053
 Complex C
   U2 SnRNP specific factors
    122587053
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd Desulfoferrod_N T6_Ig_like ANIS5_cation-bd
Other DBs
NCBI-GeneID: 122587053
NCBI-ProteinID: XP_043615058
LinkDB
Position
2:complement(27857275..27863474)
AA seq 513 aa
MSSTLLELTRAAHEDTERLERLIVKDLQKDLATTKDRLARSHRVRHIIDQITSTTHKLVE
IYEDQDNSRKDEIAALGGQTASGTNVFSAFYDRLKEIREYHRRHPSARVIDTSDESEQLL
EEEPQIEFSGEEASGRYLDLHELYNDYINTKFGKEFIKQFDKQFDYSSYLEVFSQPHLIP
RKLKISRQYREYLSKMIEYLVYFFERTEPLQDLDRIFSKVVSEFEEQWDDGKVDGWKDEA
QENGHDPEQHASIDLDYYSTVEELIELGPEKLKEALSVLGLKTGGTVQQRAERLFLTKHT
PLEKLDKKHFVKGAQRPQQNGVVATSHQDDSKEIALMEAKLVKLCELLSEIITRTKENCV
NKQAQRYEEIDREDEEVPEVESDEDDQQIYNPLKLPISWDGKPIPYWLYKLHGLGQEFKC
EICGNYSYWGRRAYERHFKEFRHQYGMRRLGIPNTKNFNEITSIEEAQKLWERIKEKQGV
NKWRPELEEEYEDREGNIYNKKTYTDLQRQGLI
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcatctacgctattagagctaacacgagcggctcacgaagacaccgagcggctcgag
agactaattgtgaaggatctacaaaaagatctggctacaaccaaggaccgtcttgcacgg
agccaccgtgttcgccatatcattgatcaaatcacttctacaactcacaaactcgttgaa
atctatgaagatcaagacaattcgaggaaagatgaaatagctgccttgggtggacaaact
gcatcgggcactaatgttttcagcgcattttatgaccgactgaaagagattcgtgagtac
cataggcggcatccatcagcacgagttattgacaccagtgatgaatccgagcaattactt
gaagaggaaccacaaattgagttcagtggagaggaagcttctggacgctacctagatctg
catgagctgtataatgattacatcaatactaagtttggcaaggaattcatcaagcagttt
gacaagcaatttgattattcctcttaccttgaagtgttttcacaaccacatcttatcccc
cgaaaactgaaaatatcaaggcaatacagggaatatctcagcaaaatgatagagtatctg
gtgtatttctttgagcgcacagagcccctgcaagatcttgatagaatattctcaaaggtt
gtatcagagtttgaagagcaatgggatgatggcaaagttgatgggtggaaggacgaggct
caagaaaatggacatgatcctgaacagcatgcttcaattgatctggactactatagtaca
gttgaggaactcatcgaacttggtcctgagaagctgaaggaggcattgagtgtcctagga
ttaaagacaggaggtactgttcaacagcgtgccgaaaggctttttctcacaaagcacacc
cctcttgaaaagctggacaaaaaacacttcgttaaaggtgcccaaagaccccaacagaat
ggggtggttgctacttcacaccaagatgattctaaagaaattgccctcatggaggctaag
ttagtgaagctatgtgaactcttatctgagataattactcgaaccaaggagaactgtgtg
aacaaacaggctcagcgatacgaggaaatagatagagaggatgaggaagtacctgaagtg
gagagtgacgaagatgaccagcagatttataatcctttgaaattgccaataagttgggat
ggaaaacctattccatattggctctataagcttcatggtcttggtcaggagttcaagtgt
gaaatatgtggaaactacagttactgggggcgaagagcttatgagcggcatttcaaggaa
tttcgacaccaatatggtatgcgtcgacttggcatccccaacaccaaaaattttaatgag
attacatcaatagaggaagcccaaaaactttgggagagaatcaaagagaagcagggggta
aacaagtggcgaccggaactcgaggaagaatatgaagatagagagggaaatatttacaac
aaaaagacgtacaccgatctccagcgccaaggcttgatatga

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