Erigeron canadensis (horseweed): 122594057
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Entry
122594057 CDS
T07610
Name
(RefSeq) meiotic recombination protein SPO11-1 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecad03036
]
122594057
Chromosome and associated proteins [BR:
ecad03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
122594057
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
DUF7281
Motif
Other DBs
NCBI-GeneID:
122594057
NCBI-ProteinID:
XP_043622469
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Position
3:36863..48133
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AA seq
393 aa
AA seq
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MEINNIMEGKNSSSHMLQKKIRDFTGSIVESISNGRSPVIYFNRFSNYCTDPSGNCYCSH
DTVKGVEILTLQREYHARRLDILLRVLLIVQQLLQENKHGSKRDIYYMHPSVFREQSVVD
RTINDICILLQCSRHNLNVVSVAKGLVMGWLRFSEADRITNCLSHPDTAHSIPVHIEEVK
DIISVADYILVVEKESVFQRLANDCFCKTNRCIVITGRGYPDIPTRRFLRLLTEQLKLPV
YCLVDCDPYGFDILTTYRFGSMQMAYDAKIMRLPEIQWIGAFPSDVEKYSIPQHCLLPMT
TEDRIKTEAILKRCYLQRVVPQWRLELQLLLESGVKFEIEALSVHSLTFLSKGYLPSKIQ
GGFSTEHPTFYSLRHCIIPDTGLLSESSLQSLV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaaattaataatataatggaaggaaaaaattcatccagccatatgttgcagaagaag
atacgagattttaccggttcaattgtcgaatccatttccaacggtcgttcccctgtgatc
tacttcaatcgtttttctaattactgcaccgatccttctggaaactgctattgcagccat
gatactgttaagggagtggagattctcaccctgcaacgggagtaccatgcacgtaggtta
gacattttactgcgagtactgcttattgttcaacaacttctgcaagagaataagcatggg
tcaaagagagacatttattacatgcatccttctgtgtttcgagaacaatccgttgttgac
cgcaccatcaatgacatttgcatccttcttcagtgcagtcgccacaatctgaatgttgtg
tctgttgcgaaaggattggtgatgggatggctgagattttcagaagctgatagaattaca
aactgtctaagtcaccctgatactgcacactctattccggtacacatagaagaagtgaaa
gatatcatcagtgtcgcagactacatactagtggtggagaaagaatcagtatttcaacgg
ctagcaaacgattgtttttgcaagactaatcgttgcattgtcatcacgggcagaggttat
cctgatattccaacaaggaggttcttgcggctactcaccgaacagctgaaattgccggtc
tattgcttggttgattgtgatccatatggctttgacatcttgacaacataccggtttggt
tcaatgcaaatggcatatgatgcaaagattatgaggcttcctgagatacaatggattgga
gcatttccgtcagatgtggagaaatatagtattccacaacattgtcttcttcctatgaca
accgaagataggatcaaaacagaggcaattttaaagcgatgttatctgcagagggttgtg
ccacaatggaggttggaactacagctgctgctggaaagtggagtcaagtttgagattgaa
gcattatctgttcactcgcttaccttcttgtcaaaagggtatctaccttctaagatacaa
ggcgggttctccacagaacatcctaccttttactctctaagacactgcattatacccgac
acagggttgttgtctgaaagttcactccagagtcttgtatga
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