Erigeron canadensis (horseweed): 122600147
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Entry
122600147 CDS
T07610
Name
(RefSeq) tryptophan synthase beta chain 1-like
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00260
Glycine, serine and threonine metabolism
ecad00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01230
Biosynthesis of amino acids
Module
ecad_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122600147
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122600147
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
122600147
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
122600147
NCBI-ProteinID:
XP_043628748
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Position
5:32044435..32048344
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AA seq
466 aa
AA seq
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MACTHSSSTAIVKPQNSSYLKKPCTSYPVHHHPTTFKSWTPISKSFSVSCLMTNSQSIEV
VHDEPAVHLRPDSLGRFGKFGGKYVPETLMYALSELELAFNALSSDHDFQEELNSILKDY
VGRETPLYFAERLTEHYKRPTGEGPEVYMKREDLNHTGAHKINNAVAQALLAKKLGKERI
IAETGAGQHGVATATVCARFGLQCIIYMGAQDMERQALNVFRMKLLGAEVRPVHSGTATL
KDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDV
LVACVGGGSNAIGLFHEFVDDKDVRLIGVEAAGFGLDSGKHAATLTKGEVGVLHGAMSYL
LQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDLGRAEYYSITDEEALEAFKRLSRLEGII
PALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVHTAIKYLQV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtacacattcatcatccaccgccattgttaaacctcaaaattcttcatatctt
aaaaaaccttgcacatcatatccagtacatcaccaccccaccacattcaaatcttggaca
cccatttcgaaatcattttcagtttcatgcttaatgaccaatagccaatcaatagaggtg
gtccatgatgaaccggcggtccatctccgaccggattctcttggccggtttggtaaattt
ggtggcaaatatgttcctgagacattaatgtatgctttgtctgaacttgagttggctttt
aatgccctgtcttctgaccatgattttcaggaggagttaaattccatactgaaggactac
gttggtagggaaacccctctttattttgctgaaagacttacagaacattataaacgtcca
accggtgaaggaccagaagtttacatgaaaagggaagatctgaaccatacaggtgcacat
aagatcaacaatgcggttgctcaagctttgctagccaagaagttgggtaaagaacgtatc
attgccgaaactggggctgggcagcatggagttgcaaccgccactgtgtgtgctcgtttt
gggttgcagtgtattatttatatgggtgctcaagatatggaaagacaggcacttaacgtg
ttcagaatgaagctacttggagcagaggttagaccagttcattctggcacagctacactg
aaggatgctacatcagaagccataagggactgggtaaccaatgttgaaacaacccattac
atattgggttcagttgctgggccacatccctaccccatgatggtgcgggaattccatgca
gtgattggtaaagaaacaagaaaacaggcattggaaaaatggggcggaaagccagatgta
ttggttgcttgtgtaggtggtgggtcaaatgccattggtctctttcatgagtttgtcgat
gataaagatgttagattaatcggtgtggaggctgcgggttttggactagacagtggaaaa
catgcagctacattgaccaaaggagaggtcggggtcctgcatggagccatgagctatttg
ttgcaggatgatgacggccagattattgagcctcactctataagtgcggggttggactac
cctggagttggaccggagcacagctttctgaaagatctaggccgtgcggaatactatagc
atcactgatgaggaggcattggaagcctttaagagactgtctagactagagggtataatc
ccagcactggaaacatcgcatgcactggcttatctggagaaattgtgcccgacactacca
aatggaaccaaagttgttgtcaattgcagtggtagaggagacaaagatgtgcatactgcc
ataaaatacttgcaggtttga
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