Erigeron canadensis (horseweed): 122606512
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Entry
122606512 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122606512
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122606512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecad03009
]
122606512
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
122606512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
TPR_DNAAF5
HEAT_2
HEAT_GCN1
14-3-3
HEAT_EZ
Cnd1
EncFtn-like
Motif
Other DBs
NCBI-GeneID:
122606512
NCBI-ProteinID:
XP_043635308
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Position
7:4494790..4506509
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AA seq
877 aa
AA seq
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MVQHKAQLKKQHQKPQKHGFDFKKIKRKIGRKLPPPKNTTNTDVKFKAIILPEQSLVSDK
AGLAVSKKGLTLKELLQQTSHHNVKVRRDALMGIRDIFLKHPEELKMHRLSVIEKLRERM
SDEDKTVRETLYQLLKAVIFPACKEDNQRTFISLMMAYVFNAMTHLAIDVRLMAFKFFDL
VVQHYPLSFSMYAEKIIQHYKEILQKNQFNLNDKGKLKSVLAGLAYCLSLLPYNKKDSNS
STQKFVANRRILHAFESEVHVDPSGFLVIAKELKGLLPILVGGFQDFMPSVLTMPTLEAQ
SFDCVLSILKSIDFVVKFFVYGNGRNQQAEVSLTSNRRDQDMLQIVLKKLFVVFPLNPAH
QSSGKDDNRYFILNVIVSEIFFCLIDWSAPPSTFLEKFLVFIVDALSEKVCNISHSGKAF
FLKHSLPLIPFIPELITHMDSTWKLHILQAFTEVFKKCDPESSMKLLCLSAIEEMLFPKS
SFASPETSDSEIVDFQITWIREISLLLILLGDKNPVFSKAVLRLHLHLGQCTTLNSPLSR
ELDNMQYAFREFYCAVGDGDTSYGPFMKLPREIQELSICCLYFFSFLDPCMLQSIATCCL
CQDLDPLLVFRFLEVLSSAYRAGHIQIADYISFLITLLSRYEVFQVCPESSSLNVEKFGK
SNSELFRSVAKIVCSCLNQIGDDHLVFKMLEGAVIDQISNKRPLENTCALLRMILTLDSK
PTKLSEQSISRLVNVLPGYLIDVSSLQEDSGANNTSCPSKSRYFILPCLLLFHKSEKILI
DVLNAMARFISGNDAPTSDGQIGRVTSDDLSSRVIPVVRVLLLIHEDDAVRKILLCCKKE
IDDILQIIKSYEGYNLNIQEKHKIQCAYDQLKTLTGR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcataaggctcagttgaagaaacaacaccaaaagccgcagaagcacggtttt
gacttcaaaaaaataaagcgaaagattggaaggaagttacccccacctaagaataccacc
aatactgatgtcaaatttaaagctattatattaccggaacaaagtttagtatcagacaag
gcgggtcttgctgttagtaaaaaaggtttgactcttaaagagctgcttcagcaaacatca
catcacaacgttaaagttcgcagagatgcattgatgggtattagggatatctttctcaaa
catccggaagaactcaagatgcacagactttctgttatagaaaaactgcgcgagcgcatg
agtgatgaagataaaactgttcgtgagaccctatatcaacttctaaaggcagtcatattt
cctgcctgtaaagaggataaccagcgaactttcatatcattgatgatggcatatgtattc
aatgcaatgacgcatttggcaatcgatgttcgtttgatggctttcaagttttttgacctt
gttgtccagcactacccactgtcattctccatgtatgctgaaaagatcatccaacattac
aaagagatattgcagaagaaccaatttaatctaaatgataaaggaaagcttaagagtgtc
cttgctggtttggcatactgtctctcccttttgccgtataataagaaggatagtaactcg
tcaacccagaaatttgttgctaatagacgaattttgcatgcttttgagtctgaagtacat
gtagatccttctgggtttttagtgattgcgaaggagcttaagggacttttgcctatatta
gttggcggtttccaagattttatgccttcagttttgacaatgcctactttggaagcacaa
tcatttgattgtgtgctttctatattgaaaagtatagattttgttgtcaagttctttgtt
tatgggaacggcagaaatcaacaagctgaagtttcactaacttccaacagaagagatcaa
gatatgttgcagattgttttaaagaagttatttgttgtctttcccttgaacccggcacac
cagtcatcaggaaaggatgataataggtattttatcttaaatgttattgtttcggagatc
ttcttttgcttaattgattggtcagctcccccatctacctttctggaaaagttcctggtg
ttcattgtagatgcattgtctgagaaggtgtgcaacatttcacattctggcaaagcattt
ttcttgaagcattcacttccacttatccccttcatcccggaactgatcacgcacatggat
agtacttggaaattacacatacttcaggcttttacagaggttttcaagaagtgtgatcca
gagtcttcaatgaaattactttgtctttcagcaattgaagagatgctatttcctaaaagc
agttttgcatccccagagacaagtgattcagaaatagtggactttcaaatcacgtggatc
agagagatatctctattgctaatcctcttgggtgataaaaacccagtgttctcaaaggct
gtattgcgtcttcatcttcatctgggacaatgtactactctgaactctcctctctcacgg
gagcttgacaacatgcagtatgcatttagagaattttactgtgcagtgggtgatggtgat
acttcctatggtccttttatgaagcttccaagagagatccaggaactttctatctgttgc
ctgtatttcttctctttcctggacccatgcatgcttcagtcgatagctacttgttgcttg
tgccaggatctggatccattactcgtatttcgtttcttggaggttctgagttctgcttac
agagctggacatatccagattgccgattatattagttttctcatcacgttattgtcacga
tatgaagtttttcaagtttgtcctgaaagcagttcgctcaacgtggagaaatttgggaag
tcaaattctgaattgtttaggtctgtcgccaaaattgtttgctcttgtctaaatcagatt
ggggatgatcatcttgtttttaagatgctagagggagcagttattgatcagatttcaaat
aaacgacccttggagaacacatgtgcattgcttagaatgattctcacacttgattcaaag
cccacaaaactttctgagcagagcatttccagattagtcaatgtccttccaggatacttg
atcgatgtttctagtttacaagaagattctggggcaaataacaccagttgtcctagcaaa
agccgttactttattttgccttgtcttctcttgtttcataagagtgaaaagattttaatt
gatgtcttgaatgcgatggcacgttttatctctggaaacgatgcacctacttccgatggt
caaattggtcgtgttacgagtgatgacctttcaagcagggtaattccagtcgttcgtgtc
ctcctgctaattcatgaggatgatgcagttcgaaaaatactattgtgttgcaagaaagag
attgatgacatactgcaaatcataaagtcttatgaaggatacaatttgaacatccaagag
aagcacaaaatacaatgtgcatatgatcaattaaagacactcactggtagatag
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