KEGG   Erigeron canadensis (horseweed): 122607285
Entry
122607285         CDS       T07610                                 
Name
(RefSeq) WD repeat-containing protein PCN-like
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122607285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ecad03009]
    122607285
Ribosome biogenesis [BR:ecad03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    122607285
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Ge1_WD40
Other DBs
NCBI-GeneID: 122607285
NCBI-ProteinID: XP_043636160
LinkDB
Position
7:complement(25380445..25386439)
AA seq 802 aa
MLKFYKCSSTSLQWNPSPIVALATSLDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIQG
DPNLRVSSLVWCGSGVGGLPAGRLFSSSIDGSISEWDLFNLTQKVVVDPIGVSIWQMATN
SLSKQQVNTKHALASIENGHATDSDSDITSDSEIEGGAHELYEGSITDSSCIAIACDDGC
VRLYNISDSDQFNYHKSLPRVSGRVLSVTWSPDSKMIYSGSSDGFIRCWDAKSSHEVYRI
TVGLGGLGGGSDLCVWSLLALRCGTLVSADSSGSVQFWDSLHGTLLQAHSCHKGDVNALA
ASPSHTRVFSAGSDGQIILYKLSGNATGSADDRSCLKAVKKWVYVGYVRAHTHDVRALVV
AVPISREDLLPDEKVKRARGTDKSIDFSYNKWAHTGIPMLISAGDDTKLFAYSANEFTKF
APHDICPAPQRPPVQLVCSTANKFAYLLLVQASHWLDIFTVNVKKDVSGPGGSVSTTDMV
ARVKSKGSRKIICSSFSSSGRFFAYSDHVRPCLFELKKNVVGKSVWSITKRKLPTSIPFA
HSMIFSSDSSRLMISGHDRMIYVVDVGSLELTHRFTPCRKETDEELPPTQPPITKMFTSL
DGQWLAAVNCFGDVYIFNLETQRQHWFISRLDGASVTAGGFSPRNSNVLIISTSSNQVYV
FDVDAKKLGEWSRHNTFILPRRYQDFPGEVIGLTFPPSTSSSSVIIYSSRAMCFIDFGMP
IGQDEDHEKVYSPLNGKLKRKLIGHEYDSKKGGRNFELCAFREPVLYIGHLSKGSVLVID
KPWLQVVKTFDAQPVHRHIYGS
NT seq 2409 nt   +upstreamnt  +downstreamnt
atgctgaagttctacaaatgtagcagcacctcactccaatggaacccatccccgattgtc
gctttagccactagcctcgacgactctcaagtcgccgccgccagggaagacggctctctc
gaaatttggctcgtctcccctggtgctgttggctggcactgtcaactgacaatacagggt
gacccaaatttgagagtttcgtcgttggtatggtgtggttcgggtgtcggtgggttacct
gctgggaggctgttttcatcaagtattgatggatcaatttcagagtgggacttgtttaat
ttgactcaaaaggttgtggtggatcctatcggtgtatcaatctggcaaatggccactaat
tctttgagtaagcagcaggttaatacaaaacatgctttggcttctatagagaatggacat
gctactgatagcgatagtgatatcactagtgatagcgagattgaaggtggtgcacatgag
ttatatgaagggtcgatcactgatagttcatgtatagcaattgcttgtgatgatggttgt
gttcgattatacaatatctcagactcagatcagtttaattaccataaatcgctgccaagg
gtcagtggtcgtgtattaagtgttacttggagtccagattcaaagatgatatattctgga
agtagtgacgggtttataagatgctgggatgctaaatcgtctcatgaagtttatcgaatt
actgttggtcttggaggcttaggcggtggctctgatctttgtgtatggtctttacttgca
ctgaggtgcgggactcttgtgagtgcagatagtagtggcagtgtccaattttgggacagt
ttgcatggaactctcttgcaagcacattcttgccacaagggagacgtcaatgctctggcg
gctagtccaagccataccagggtattttctgctgggtcagatggccagattatattgtat
aagctttctgggaatgccacaggctctgcggatgatagatcatgtttgaaagcagttaaa
aaatgggtatatgttggttatgtgagagcccatacacatgatgttagagccttggttgtt
gctgtacccataagtcgtgaagatttactgcctgacgaaaaagtaaaaagagctcgtgga
acggataagtcaattgatttcagttacaataagtgggctcatacgggtatccctatgctt
atatcagctggtgatgacactaagctttttgcgtattcagccaatgagtttaccaaattt
gctcctcatgatatttgtcctgcaccacaaagaccacctgttcaattggtgtgcagtaca
gctaataagttcgcttatctgcttctggtccaggcttcacactggttagatatttttacg
gtcaatgtgaaaaaagatgtttccggcccaggtggcagtgtttcaactacagatatggtt
gctcgagttaaaagcaagggttcacggaagatcatttgcagctccttttcatcttctggg
aggttttttgcctactcggatcatgtgaggccttgcttatttgagttgaaaaagaatgtg
gtcgggaaaagtgtgtggtccataactaaaagaaaacttcctacatccataccatttgcc
cattccatgatctttagttccgattcatctcggttaatgatttctggacacgacagaatg
atatatgttgtggatgttggaagcctggaattaacacataggttcactccctgtcggaag
gaaactgatgaagaattgccacctactcagccgccgataacaaagatgtttactagtctt
gatggacagtggctagctgctgtcaactgctttggagatgtgtatatattcaatctagag
acacaaaggcaacactggtttatatcacgattggatggtgcctcggttactgctgggggg
tttagtcctcgaaatagcaatgtgctaataatctctacatcttcaaatcaagtgtatgta
tttgatgtggatgctaagaaattaggagaatggtctagacacaacacatttatcttgcca
cgaagatatcaggactttcctggagaggttattggactcacatttccgccatctacaagc
tcctcttctgtcatcatttacagttcccgggcaatgtgcttcattgactttggaatgccg
attggtcaagatgaagatcatgagaaggtatacagtccattaaatgggaaattaaaacgc
aagttgatagggcatgagtatgatagtaaaaagggtggtaggaattttgaactttgtgcg
tttagagaacctgttttatacattggccacctctcaaaaggttctgtattggtcatagac
aaaccatggttgcaagtggttaagacatttgatgcccagcctgttcacagacatatatac
gggtcataa

DBGET integrated database retrieval system