Enterobacter cancerogenus: CWI88_18010
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Entry
CWI88_18010 CDS
T05545
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ecan
Enterobacter cancerogenus
Pathway
ecan03030
DNA replication
ecan03430
Mismatch repair
ecan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWI88_18010
03430 Mismatch repair
CWI88_18010
03440 Homologous recombination
CWI88_18010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecan03032
]
CWI88_18010
03400 DNA repair and recombination proteins [BR:
ecan03400
]
CWI88_18010
Enzymes [BR:
ecan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWI88_18010
DNA replication proteins [BR:
ecan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWI88_18010
DNA repair and recombination proteins [BR:
ecan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWI88_18010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AUJ82834
LinkDB
All DBs
Position
complement(3780331..3783813)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGTAHGV
GMKPIVGADFHVQSELLGDEMTQISVLAMNNTGYQNLTLLISKAYQRGYGAQGPWIDRDW
LAELNEGLLLISGGRMGDVGKCLLRGNSALVDQCVSFYEEHFPDRYYLELIRTGRADEEN
YLHAAVALAEQRGLPVVATNDVRFLESGDFDAHEIRVAIHDGFTLDDPKRPRNYSSQQYM
RTEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EERLEFLFPDEAERKEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNEHGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYSNCQPWPEQVVLDGERETLGLY
LTGHPINQYIKEIERYVGGNRLKDMHPTDRGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGAAWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgatcgatggg
ctggcaaagaccgggccgctggtaaaaaaggcggccgcgcttggcatgcctgcgctggcg
atcaccgattttaccaacctgtgtggcctggtgaagttctacggaacggcgcatggcgtg
gggatgaaacctatcgtcggcgcggattttcatgtgcaaagcgaactgcttggcgatgag
atgacgcaaatctccgtgctggcgatgaacaacacgggttatcagaaccttaccctgctt
atctcaaaagcctatcagcgcggctatggcgcgcaggggccgtggatcgacagagactgg
ctggccgaactgaatgaaggcctgctgctgatctccggcggccgcatgggtgacgtcggc
aaatgcctgctgcgcggcaacagcgcgctggtggaccagtgcgtgtcgttctacgaagaa
catttcccggatcgctattaccttgagctgatccgcaccggtcgcgcggatgaagagaac
tatctgcatgccgccgtagccctggcggaacagcgcgggctgcccgttgtggcaaccaac
gatgtgcgtttcctggaatcaggcgattttgacgcgcatgagatccgcgtcgctattcat
gacggcttcacgctcgacgatccgaaacgtccgcgaaattactcctcgcagcagtacatg
cgcacggaagaggagatgtgtgaactcttctctgatatcccggaagcgctggaaaacagc
gtagagattgccaagcgctgtaacgtgaccgtgcgtctcggcgagtacttcctgccgcag
ttcccgacgggcgacatgaccacggaagatttcctggttgtgaaatcgaaagaagggctg
gaagaacgcctggaatttctcttcccggatgaagcggaacgtaaagagaagcgcccaccc
tacgacgaacgtctggatattgagctgcaggttatcaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacggcgtgccggtaggcccg
ggccgtggttccggtgctggttcgctggtggcgtacgcgctcaaaatcaccgacctcgat
ccgctggagtttgacctgctgttcgaacgtttccttaaccctgaacgtgtctccatgccc
gacttcgacgtcgacttctgcatggagaaacgtgaccaggtgattgagcacgttgcagac
atgtatggccgcgatgcggtatcgcagattattaccttcggtacgatggcggcgaaagcg
gttatccgcgacgttggccgcgtgctggggcatccgtacggcttcgtcgatcgcatctcc
aagctggtgccgcccgatcccggcatgacgctggcaaaagcctttgaagccgagccgcag
ctgccggaaatctacgaagcagacgaagaagttaaagcgctgatcgacatggcgcgtaag
ctcgaaggcgtcacgcgtaacgccggtaaacatgcgggcggggtggtgattgccccgacc
aaaattaccgattttgcgccgctctattgcgatgaggcgggccatcacccggtcacacag
ttcgataaaaacgacgtggaatacgccgggctggtgaagttcgacttcctcggcctgcgc
accctgacgatcatcgactgggcgctgaaaatgatcaacccgcgccgcgagaagcagggt
ctggagccgatagacatcgccgccatcccgctggatgataaaaaaagtttcgacatgctg
cagcgctcggagaccaccgccgtcttccagcttgaatcccgcggcatgaaagacctgatt
aagcgcctgcagcccgactgcttcgaagatatgatcgcgctggtggcgttgttccgtccg
gggccgctgcagtcagggatggtggataactttatcgaccgtaagcacgggcgcgaagag
atttcctatcccgacgtgcagtggcagcatgaaagcctgaaaccggtactggagcctacc
tacggcatcatcctgtatcaggaacaggtcatgcagattgcccaggtcctgtcaggttac
acccttggcggcgcggacatgctgcgtcgtgcaatgggtaagaaaaagcctgaagagatg
gccaagcagcgttctatctttgaggacggggcgaaaaagaacggcattgacggcgaactg
gcgatgaaaatcttcgacctggtagagaagttcgccgggtacgggtttaacaaatcccac
tccgctgcctatgcactggtctcctatcagacgctgtggctgaaggcccactatccggct
gagtttatggcggcggtgatgacggccgatatggacaacaccgagaaagtggttggcctg
gtcgacgagtgctggcgcatggggcttaagatcctgccgccggatatcaactccgggctt
taccatttccacgtgaacgagcacggggagattgtctacgggatcggcgcgatcaaaggt
gtcggtgaaggtccaatcgaggcgatcatcgaggcgcgtaacaatggcggctatttccgc
gagctgttcgacctctgcgcccggactgacactaaaaagcttaaccgccgcgtgctcgaa
aaactgataatgtccggggcattcgacaggctggggccgcaccgcgccgcgctgatgaac
tcgctgggcgatgcgttgaaagcggccgatcagcacgcgaaggcagaagcgataggccag
gccgatatgtttggcgttctggcggaagagccagagcagattgagcagtcgtattccaac
tgccagccctggccagaacaggtggtgctggatggcgagcgtgaaacgttaggcttgtac
ctgacggggcacccgatcaaccagtacattaaagaaattgagcgctatgtcggaggcaac
aggctaaaagacatgcatccgacagatcgtggtaaaatcaccacggctgcggggctcgtg
attgctgcaagggtaatggtcaccaagcgcggcaatcgtattggcatctgtacattggat
gaccgttccgggcgtctggaagtgatgttgttcaccgacgcgctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagt
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagcccgtgaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgcgcgcggttgcgctttggtgcagcgtggcgtgtctctccgagcgat
cgtttactgaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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