Enterococcus casseliflavus: ECBG_03007
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Entry
ECBG_03007 CDS
T02623
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ecas
Enterococcus casseliflavus
Pathway
ecas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECBG_03007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecas03021
]
ECBG_03007
03400 DNA repair and recombination proteins [BR:
ecas03400
]
ECBG_03007
Enzymes [BR:
ecas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECBG_03007
Transcription machinery [BR:
ecas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECBG_03007
DNA repair and recombination proteins [BR:
ecas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECBG_03007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-GeneID:
15143698
NCBI-ProteinID:
EEV40738
UniProt:
C9ACX9
LinkDB
All DBs
Position
complement(3332235..3335852)
Genome browser
AA seq
1205 aa
AA seq
DB search
MAGHVVKYGKHRERRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFEDILPIEGFNG
NLSLEFVDYELKEPKYTVEEARAHDANYSAPLHVTLRLTNRETGEIKSQEVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKEGFGSTVIPNRGAWLEMETDAKDIS
YVRIDRTRKIPLTVLVRALGFGSDDTIFEIFGDSESLRNTIEKDLHKNASDSRTEEGLKD
VYERLRPGEPKTADSSRSLLNARFFDPKRYDLANVGRYKVNKKLDLKTRLLNLTLAETLV
DPETGEIIVEKGTVLTHQVMETLGAFIDNGLNSVTYYPSEDGVVTEPMTVQVIKVFSPKD
PEQEVNVIGNGYPDTATRTVRPADIIASMSYFFNLMEGIGNVDDIDHLGNRRIRSVGELL
QNQFRIGLARMERVVRERMSIQDTETLTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLASYAK
VNKYGFIETPYRRVDRETGRVTDKIDYLTADTEDHYVVAQANSLLNEDGSFVNDVVMARA
TSENLEVSIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLINPKAP
WVGTGMEYKSAHDSGAALLCKHDGIVEYVDAAEVRVRRDNGALDVYSVTKFRRSNSGTSY
NQRPLVALGEKVEKGDILADGPSMEQGEMALGQNVLVAFMTWEGYNYEDAIIMSRRLVKD
DVYTSVHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEMGIIRIGAEVKDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVHDVKIFTREAGDELSPG
VNMLVRVYIVQKRKIHEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLGVPS
RMNIGQVLELHLGMAARQLGIHVATPVFDGASDEDVWATVAEAGMASDAKTVLYDGRTGE
PFDGRISVGVMYMIKLAHMVDDKLHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDMRV
LDIDDAEIELRDMDDDDDDLITVDALTKFAEQQTARELEQKAQTEAKNAADALNQQIETA
EDRLQ
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
ttggctggacacgtagtaaaatacggaaagcatcgcgaacgtagaagtttcgcacggatc
agtgaagtattagaattaccgaatttgattgaaattcaaaccgactcttaccaatggttc
ctagatgagggcctaagagaaatgtttgaagatattttgccaatcgaaggattcaacggt
aacttgtccctagaatttgtggattatgaattgaaagaaccaaagtatacagtagaagaa
gcccgtgcccatgatgcaaactattcggcaccattacatgttactttgcgtttgacgaac
cgtgaaactggggaaatcaaatcccaagaagtattctttggtgatttcccattaatgact
gaacaaggaacctttatcatcaacggggcagaacgggttatcgtttctcagttggtccgc
tctccaggtgtatatttccatggcaaagtcgataaaaacggcaaagaaggctttggttca
actgttattcctaaccgcggtgcgtggttagaaatggaaactgatgccaaagatatctct
tacgtacggattgaccgtacccgtaaaattcctttgacggtcttagtccgtgccctaggg
tttggttctgatgatacgatctttgaaattttcggagacagtgaatcattgcgcaacacg
atcgaaaaagacttgcataaaaacgcaagcgattctcgtaccgaagaaggattgaaagat
gtttacgaacgtcttcgtccaggcgagccaaaaacagcagacagctcacgtagtttgctg
aacgcacgtttcttcgatccaaaacgttacgacttagcaaatgttggtcgttacaaagta
aacaaaaaattagacttgaaaacacgtctattgaacttgaccttagcagaaaccttggtt
gaccctgaaacaggcgagatcattgttgaaaaaggcactgttttgactcaccaagtcatg
gaaacactaggcgcatttatcgataatggcctaaacagtgtaacgtactatccatcagaa
gatggggtcgttaccgaaccaatgaccgtccaagtcatcaaagtcttttcaccaaaagat
ccagaacaagaagtcaacgtgatcggtaatggctatccagatactgctacacgtacggtt
cgtccagcagacatcattgcttcaatgagctacttcttcaacttgatggaaggcattggc
aatgtcgatgacatcgaccacttaggaaaccgtcggattcgttctgttggtgaattattg
caaaaccaattccggatcgggcttgctcggatggagcgtgtcgtgcgtgaacggatgtcg
atccaagacaccgaaaccttgacaccgcaacaattgatcaacattcgtccggttgtcgca
agtatcaaagaattctttggttcttctcagttgtcacagttcatggaccaaacaaaccca
ctgggtgagttgacccataaacgtcgtctatctgccttaggacctggtggtttgacccgt
gaccgtgccggctatgaagtccgagacgttcactattcccactatggccgtatgtgtccg
atcgaaacgcctgagggaccaaacatcgggttgatcaacagcttggcctcttatgccaaa
gtcaacaagtatggcttcattgaaacaccataccgtcgtgttgaccgcgaaacaggccgt
gttactgacaagatcgattacttgactgccgataccgaagaccactacgttgtggcccaa
gcaaacagcttgttaaatgaagacggctctttcgtaaacgacgttgttatggcgcgtgct
acttctgaaaacttggaagtttcgatcgataaagtcgactacatggacgtatcaccaaaa
caagtagtcgcagtcgcaaccgcatgtattcctttcttggaaaacgatgactccaaccgt
gccttgatgggtgccaacatgcagcggcaagctgtaccattaatcaatccgaaagcacct
tgggttggtactggtatggaatacaaatcagcacatgactcaggagctgctttgttatgt
aaacatgatggaatcgtagaatacgtggatgcggccgaagtgcgcgttcgtcgtgacaat
ggcgcattggacgtttattctgttaccaaattccgtcgttcaaactcaggaaccagctac
aaccaacgtccattagtggcacttggtgaaaaagtcgaaaaaggcgacatcttagcagat
ggcccatctatggaacaaggcgaaatggcactaggacaaaacgtcttagtcgcattcatg
acttgggaagggtacaactatgaagatgccatcatcatgagccgtcgtttggtgaaagat
gatgtttacacttctgtccatattgaagaatatgaatcagaagcccgcgacacaaaatta
ggacctgaagaaatcactcgcgaaatcccgaacgttggggaagacgcattgaaagaccta
gacgaaatggggattatccgcattggtgcggaagtcaaagatggcgatctgcttgttggg
aaagtcacgccaaaaggggtaacggaactttcagcagaagagcgtttattgcacgcaatc
tttggtgaaaaagcccgcgaagtgcgtgacacttctctacgcgtgcctcacggcggcggc
ggaatcgtccacgatgtcaaaatctttacccgcgaagctggcgatgaattgtcaccaggt
gtgaacatgctggttcgcgtttatatcgttcaaaaacggaaaatccatgaaggggataaa
atggccggacgtcacggaaacaaaggggtcgtttctcgcattatgccagaagaagacatg
cctttcttaccagatggcacaccagtcgatatcatgctgaacccattaggggtaccttct
cggatgaacattggacaagtattagagttacacttaggaatggctgcgcgtcaactaggc
attcacgtggcaacaccagtctttgatggtgccagcgatgaagatgtttgggcaaccgtt
gctgaagcaggaatggccagcgatgccaaaacagtgctttacgacggacgtaccggcgaa
ccatttgatggccgcatctccgttggtgtcatgtacatgatcaaattggcccacatggtc
gatgataaattgcatgcccgttccattggaccttactcattggttactcaacaaccattg
ggaggaaaagctcaatttggtggacaacgtttcggagagatggaagtttgggcactggaa
gcatacggtgctgcttacaccttgcaagaaatcttgacctacaaatcagatgacgtggtt
ggtcgtgtgaaaacatacgaagcgatcgtcaaaggggaaccaattccaaaaccaggtgta
ccagaatcattccgcgtattagtaaaagaattgcaatcactgggtctagacatgcgtgtc
ctagatatcgatgatgcagagatcgaactacgtgatatggatgatgacgatgatgatttg
atcaccgttgatgccttaacaaaatttgcggagcaacaaacagcccgcgaattagaacaa
aaagcacaaacagaagctaaaaatgccgccgacgcgttgaaccaacaaatcgagacagca
gaagatcgcttgcaataa
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