Equus caballus (horse): 100050228
Help
Entry
100050228 CDS
T01058
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
ecb
Equus caballus (horse)
Pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100050228 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecb03041
]
100050228 (CRNKL1)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100050228 (CRNKL1)
Spliceosome [BR:
ecb03041
]
Complex B
Other components
Prp19-related factors
100050228 (CRNKL1)
Complex C
100050228 (CRNKL1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
100050228 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
100050228
NCBI-ProteinID:
XP_005604508
Ensembl:
ENSECAG00000022215
VGNC:
16873
UniProt:
F6ZCC1
LinkDB
All DBs
Position
22:5153326..5170644
Genome browser
AA seq
687 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHGYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANV
PPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRR
LLQRTQHVKVWISFAQFELSSGKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRNF
EDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEAAEQDPDKDIDESGS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaccgcggctgggaagcagaggattcccaaagtggccaaggtgaaaaac
aaagccccggctgaggtacagataactgcagaacaactcttgagggaagctaaagagaga
gaacttgagcttctccctcctccgcctcaacagaagatcacagatgaagaagagttaaat
gattacaaactaaggaaaaggaagacttttgaagataacataaggaaaaacaggacagta
attagtaactggataaaatacgcacaatgggaagagagtctaaaagagattcaaagggct
cgatccatatacgaacgtgctttagatgtggactatcgaaatattacactctggctgaaa
tatgccgaaatggaaatgaagaatcgtcaggtcaaccatgcccgaaatatctgggaccgg
gccataacaactctgcctcgggtcaaccagttctggtacaagtacacgtacatggaggag
atgttgggaaacattgctggcgcccggcaggtgtttgagcgctggatggaatggcagcct
gaggagcaagcctggcactcctacatcaattttgagctgcgatacaaggaggtggatcgg
gcccgcaccatttatgaacgctttgttctcgtgcatcctgatgtgaagaactggatcaaa
tatgcccgctttgaagaaaaacatggttattttgcccatgcacggaaagtgtacgagaga
gctgtcgaattctttggagatgaacatatggatgaacacctttatgttgcctttgccaaa
tttgaagaaaatcagaaagaatttgaaagggtacgagtgatctacaagtatgccctggat
agaatttcaaaacaggaggcccaagaactctttaaaaattataccatctttgagaagaag
tttggtgataggcggggcattgaagacatcatcgtgagcaaacggagattccagtatgaa
gaagaagtgaaggctaatccacacaattatgacgcgtggtttgattacttgcgtttggtg
gaaagtgatgcagaagcagaaacagtgcgagaagtctatgaaagagccattgccaatgtc
ccacccattcaggagaagaggcactggaagcgctacatctatctgtgggtcaactatgca
ctctatgaagaactggaggcaaaggatcctgagaggacaagacaggtgtatcaagcctct
ttggaactaattcctcataaaaagttcacatttgccaaaatgtggttactatatgcacaa
tttgaaataagacagaaaaatttaccatttgccagaagagctttgggaacttccataggc
aaatgtccaaagaacaagttatttaaaggttacatcgaattggagctacagcttcgagaa
tttgacagatgccggaagctttatgaaaagttcctggaatttggacctgaaaattgtact
tcttggattaaatttgcggaattagagacaatccttggtgacattgagagagcccgggca
atctatgaattagccatcagtcagccacgcttggacatgccagaggtgctttggaaatca
tatattgattttgaaattgagcaggaagaaactgaaagaacacgaaatctttaccgacga
ttgcttcaacggacacaacatgtcaaggtgtggatcagttttgctcagtttgagttgtct
tcagggaaagaaggaagtttggctaaatgcagacaaatttatgaagaggctaacaaaacc
atgcgaaactgtgaagaaaaggaagagagacttatgctgctggaatcttggcgaaacttt
gaagatgaatttggaacagtatcagataaggagagagtggacaaactcatgccagagaaa
gtcaagaagagaagaaaggtccaggctgatgatggctctgatgcaggctgggaagaatac
tatgattacatctttccggaagatgctgccaaccaacccaacctcaagctcctggccatg
gccaaactctggaagaaacagcaacaggaaaaagaggctgccgagcaagacccagataag
gacatcgacgagagtggatcctga
DBGET
integrated database retrieval system
