Equus caballus (horse): 100051816
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Entry
100051816 CDS
T01058
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100051816 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100051816 (SCN2A)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100051816 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
FraC
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
100051816
NCBI-ProteinID:
XP_014588001
Ensembl:
ENSECAG00000020749
VGNC:
22734
LinkDB
All DBs
Position
18:45407620..45549599
Genome browser
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTIFNRTVSMFNWDDYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGV
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KLREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNVRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKVKEGDGTPIKEDILIDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccaccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaggatgatgaaaatggcccgaagccaaatagtgacttggaagcaggaaaa
tcccttccgtttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccgtactatatcaataaaaaaacgtttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacctctgccctgtacattttaactcccttcaaccctattcgaaaa
ttagctattaagattttggtacattcgttattcaatgtgctcattatgtgcactatcctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacgtttctacgggatccatggaattggttggatttcacagttattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcaga
gttctccgagcattgaaaacaatctcagtcattccaggcttgaagaccatcgtgggggcc
ctgatccagtcggtgaagaagctttcagatgtaatgatcctgactgtgttctgtctgagc
gtgtttgcactaataggactacagctgtttatgggcaacctgcggaataaatgtttgcaa
tggcccccagataattcttcctttgaaatcaacatcacttccttctttaataactcactg
gatgggaacggtaccattttcaataggacagtgagcatgtttaactgggatgactatatt
gaagataaaagtcacttttactttttggaagggcaaaatgacgcactgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaatccc
aactatggctacacgagctttgacacgtttagttgggccttcttgtccttgtttcgtctc
atgactcaagacttctgggaaaacctttatcaactgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctcattctaccttatcaatttaatc
ctggctgtggtggccatggcctacgaggaacagaatcaggcaacacttgaagaggctgaa
cagaaagaagctgaattccagcagatgcttgaacagttaaaaaaacaacaggaagaagct
caggcagcagctgcagcagcgtctgctgaatcaagagacttcagtggtgctggcggagtg
ggggttttctcagagagttcctcagtagcatcaaagttgagctctaagagcgaaaaagag
ctgaaaaacagaaggaagaaaaagaaacagaaagaacagtctggagaagaagagaaggag
gatggagtccgcaaatctgaatctgaagacagcataagaagaaaaggttttcgtttttcc
ttagaaggaagtaggctgacatatgaaaagaggttttcttctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggcgagccttttcagcttc
agagggcgagcaaaggatattggctcggagaatgattttgctgatgacgagcacagcacc
tttgaagacaatgacagccgaagagactctctgttcgtgccgcacagacatggagagcgg
cgccacagcaacgtcagccaggccagccgtgcctccagggtgctccccattctgcccatg
aacgggaagatgcacagcgctgtggattgcaatggagtggtctccctggtcggaggccct
tctgccctcacgtctcctgctgggcagctcctgccagagggcacaactactgaaacagaa
atacgaaagagacggtccagttcttatcatgtttccatggatttgttggaagatcctaca
gcaaggcaaagagccatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataaatttgctaacatgtgtttaatttgg
gactgctgtaaaccatggttaaaggtgaaacatcttgtcaacctggtcgtgatggacccg
tttgtggacctggccatcaccatctgcattgttttaaatacactcttcatggccatggag
cactatcccatgacagagcagttcagcagtgtactgtcggtcgggaacctggtcttcact
gggatcttcacagcagaaatgtttctcaagatcattgctatggatccatattattacttt
caagaaggctggaatatttttgatggtttcatcgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattgtcagttctccgatcatttcgactgcttcgagttttcaag
ttggcaaaatcttggccaactctgaacatgctgataaagatcattggcaattctgtgggg
gctttgggtaacctcaccttggtgctggccatcatcgtcttcatctttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgactgtgag
ctcccgcgctggcacatgcatgacttcttccactccttcctgattgtgttccgcgtgctg
tgtggagagtggatagagaccatgtgggactgtatggaggtcgctggccaaacgatgtgc
cttactgtcttcatgatggtcatggtgattggaaacttagtggttctgaaccttttcctg
gccttgctcttgagttcattcagttctgacaatcttgctgccactgatgatgataatgaa
atgaacaatctccagattgctgtgggaaggatgcagaaaggaattgattatgttaaaaga
aaactacgtgaatttattcagaaagcttttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccacaccaccata
gaaataggcaaagacctcaattatcttaaagatggaaatggaactaccagtggcataggc
agcagtgtagaaaaatatgtcgtggatgaaagtgattacatgtcgtttataaacaacccc
agcctcactgtgactgtcccaattgctgttggagaatctgactttgaaaatttaaacact
gaagaattcagcagcgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagtggatataggagctcctgctgagggagaacaacctgaggct
gaacctgaagaatcgctcgaacctgaagcctgtttcacagaagactgtgtacggaagttc
aagtgttgtcagataagcatagaggaaggcaaagggaaactgtggtggaacgtgagaaaa
acttgctataagatagtggagcataactggttcgaaaccttcatcgtcttcatgattctg
ctcagcagtggggcgctggcctttgaagatatatatattgagcagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttacatattcattctggaaatgcttctc
aagtgggttgcatatggttttcaagtatattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtctcattggttagcttaacagcgaatgccttgggttactcagaactc
ggtgccatcaaatccctcagaacactaagagctctgaggccactgagagccttatcccgg
tttgaaggaatgagggttgttgtcaacgctctcttaggagccattccatccataatgaac
gtgcttctggtttgtctgatcttttggctgatattcagtatcatgggagtgaatctcttt
gcgggcaagttttatcactgtattaactacaccaccggagaaatgtttgacgtaagcgtg
gtcaacaactacagcgagtgcaaagccctcatagagagcaatcagactgccaggtggaaa
aatgtgaaagtaaactttgataatgtgggactcggatatctttctctgcttcaagtagcc
acatttaagggatggatggacatcatgtatgcagctgtcgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttccttctttactctgaatctcttcattggtgtcatcatcgataacttcaatcaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaaggaatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtggaaactgatgaccagagtcaagaaatg
acaaacattttgtactggattaatctagtgtttattgttctgttcactggagaatgtgtg
ctgaaactaatctctcttcgttattactattttaccattggctggaatatttttgatttt
gtggtggttattctctccattgtaggcatgtttctggctgagctgatagagaaatatttt
gtgtccccgaccctgttccgagtgatccgtcttgccaggattggccgaatcctccgtctg
atcaaaggagctaaggggatccgcacgctgctctttgctctgatgatgtccctccctgca
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttggaatg
tccaactttgcctatgttaaaagggaagttggaattgatgacatgttcaactttgaaact
tttggcaacagcatgatctgtctgttccaaattaccacctctgctggctgggatggattg
ctagcacctattctcaacagtggccctccagattgtgaccctgaaaaagatcaccctgga
agctcagttaagggagactgtgggaacccatctgttgggattttctttttcgtcagttac
atcatcatatcatttctggttgtggtgaacatgtacatcgccgtcatcctggagaacttc
agtgttgctactgaggaaagtgcagagcccctgagtgaggatgactttgagatgttctac
gaggtttgggagaagtttgatcctgatgccactcagtttatagagttctccaagctctct
gattttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggggaccggatccactgccttgacattttattt
gcctttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatacagatg
gaggagcgattcatggcatcaaatccctccaaagtctcctatgagcccatcacaaccact
ttgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaggtttcatgtatatataagaaagacaaagtcaaagaa
ggtgatggaacacctatcaaagaagatatcctcattgataaactaaatgagaattcaact
ccggagaaaaccgatgtaacaccttccaccacttcgccaccttcttatgatagtgtgacc
aagccagaaaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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