Escherichia coli O6 K2 H1 CFT073 (UPEC): c0180
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Entry
c0180 CDS
T00106
Symbol
yadP
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecc03016
]
c0180 (yadP)
Enzymes [BR:
ecc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
c0180 (yadP)
Transfer RNA biogenesis [BR:
ecc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
c0180 (yadP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AAN78674
UniProt:
A0A0H2V4S8
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All DBs
Position
complement(172050..172589)
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AA seq
179 aa
AA seq
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MPHMSEPQRLFFAIDLPAEIREQIIRWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKE
KALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ
SNRPFHPHITLLRDASEAVTIPPPGFNWSYTVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcacatgtctgaaccgcaacggctgttctttgctatcgacttacctgcagaaatc
cgcgaacagattatccgctggcgcgccacacacttcccacctgaggcgggacgtccggtc
gccgccgataatttgcatctgactctggcatttttaggcgaagtgagcgcagagaaagag
aaggcgctttctcttttagccggacggattcgtcaacctggtttcacactcacgcttgat
gacgccggtcaatggctgcgttcgcgtgtggtgtggttagggatgcgacagccgcctcgc
ggcttaatccagctggcgaatatgctccgctcacaggctgcccgcagcggttgttttcaa
agcaatcgtccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgaca
atcccgccgccaggttttaactggtcgtatacggtgacggagttcaccctttacgcctcc
tcgtttgcccgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa
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