Escherichia coli K-12 DH10B: ECDH10B_0195
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Entry
ECDH10B_0195 CDS
T00666
Symbol
rnhA
Name
(GenBank) ribonuclease HI, degrades RNA of DNA-RNA hybrids
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
ecd
Escherichia coli K-12 DH10B
Pathway
ecd03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ECDH10B_0195 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecd03032
]
ECDH10B_0195 (rnhA)
Enzymes [BR:
ecd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ECDH10B_0195 (rnhA)
DNA replication proteins [BR:
ecd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
ECDH10B_0195 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
ECDH10B_0195 (rnhA)
Elongation factors (archaeal)
ECDH10B_0195 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Fe-ADH
PM0188
Motif
Other DBs
NCBI-ProteinID:
ACB01387
UniProt:
B1XD78
LinkDB
All DBs
Position
complement(209639..210106)
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AA seq
155 aa
AA seq
DB search
MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALK
EHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEW
VKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaggtagaaattttcaccgatggttcgtgtctgggcaatccaggacctggg
ggttacggcgctattttacgctatcgcggacgcgagaaaacctttagcgctggctacacc
cgcaccaccaacaaccgtatggagttgatggccgctattgtcgcgctggaggcgttaaaa
gaacattgcgaagtcattttgagtaccgacagccagtatgtccgccagggtatcacccag
tggatccataactggaaaaaacgtggctggaaaaccgcagacaaaaaaccagtaaaaaat
gtcgatctctggcaacgtcttgatgctgcattggggcagcatcaaatcaaatgggaatgg
gttaaaggccatgccggacacccggaaaacgaacgctgtgatgaactggctcgtgccgcg
gcgatgaatcccacactggaagatacaggctaccaagttgaagtttaa
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