Enterococcus cecorum: NCTC12421_01311
Help
Entry
NCTC12421_01311 CDS
T07091
Name
(GenBank) helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ecec
Enterococcus cecorum
Pathway
ecec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecec00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCTC12421_01311
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12421_01311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecec03021
]
NCTC12421_01311
03400 DNA repair and recombination proteins [BR:
ecec03400
]
NCTC12421_01311
Enzymes [BR:
ecec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCTC12421_01311
Transcription machinery [BR:
ecec03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCTC12421_01311
DNA repair and recombination proteins [BR:
ecec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCTC12421_01311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
PhoH
Motif
Other DBs
NCBI-ProteinID:
SQE55320
LinkDB
All DBs
Position
1:complement(1254041..1256371)
Genome browser
AA seq
776 aa
AA seq
DB search
MQSKKVSVRELVAFVHNEESIDNRKQSNHTALEGSKIHRKLQQSMDENYQSEVSLKTVYQ
GKQFDIQLEGRCDGIWQKENQIIIDEIKTGEHTFEQLEDATLQLFMAQAKIYAYIYALQE
KLEEVVVMVRYFCTQDEKIDKYQNQYSFDELNDYYQETMKEYEKWLIFLDKYRQNRQKKL
QALQFPYNNYRKGQRELSIAVYRTLSQEKCLFMEAPTGTGKTLSTLFPALKAMGEYNQGR
IFYLTAKTITRQVALDTMKLFEEQQSEIKTIEISAKEKICFMNECKCNPDYCPFAKNYYQ
KQKLAIWDLLNNGHFYSREQISEVAKKYECCPFELSLDLSLYSDVIVCDYNYLFDPQVYL
KRFFELEETDSYFLVDEGHNLISRAREMYSKALSLQLIKDFKKLLPKHHRKHHKILQQFI
EYCEESRKLLKDRDYLFQKELPDKLIDLGYRWSEYFRDFLLELKDEIPTWLQNLYFDLMS
FLKISEYYDDHFSFLVELVNHELQFKIFCLDPAHFIKQKLDFGKGSVLFSATLSPVQYYQ
NLLVGHTDDLTFRQSSPFNQNQFQVLVADYLPMTYKYRSQVVDSLCELIKKATDIKAGNY
FCFFPSFSYMEEVYQRYIQLYPEAEVLIQSRELKDVEKEAFLANFQAQNEQVVLGFCVLG
GVFSEGIDLKKNRLIGSIIVSVGLPQISKEQEELKRYFDEKNQQGFYYIYQLPGFNKMMQ
AAGRVIRTEEDRGVILLIDQRFSRKDYMQLYPSHWSKGVVVHDLFSMLNQLKQFWY
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtaaaaaagtttcagtaagagaattagttgcttttgtccataatgaagaaagc
attgataaccgcaaacaaagtaatcatactgcacttgaaggaagtaaaattcatcgaaaa
ctacagcaatcaatggatgagaattaccaatcggaagtatccttaaaaacggtttatcaa
gggaaacaatttgatattcagttagaaggtcggtgtgacggaatatggcaaaaggaaaat
caaattattatcgatgaaatcaagacgggtgaacacacttttgagcaattagaagatgcg
acactgcagctatttatggcacaggcaaaaatttatgcttacatttatgccttgcaagaa
aagttagaagaagttgtcgtgatggtacgttatttttgtacacaagatgaaaaaatcgat
aaatatcaaaatcaatatagtttcgatgaattaaatgattattatcaagagacaatgaaa
gaatatgaaaagtggctcatattcttagataaatatcggcaaaatcggcaaaaaaaatta
caagcattacaatttccctataacaattatcgaaaaggacaacgtgaattatccattgca
gtctatcgtacattgtcccaagaaaaatgtttgtttatggaagcacctacgggaacggga
aaaacattatcaaccctttttcctgcactgaaagctatgggagaatacaatcaaggacgt
attttttatctaacagccaaaacgattacaagacaagttgctttagatacgatgaagtta
tttgaggagcaacaaagtgaaattaaaacgattgaaatttcagctaaagaaaaaatttgc
ttcatgaatgagtgcaaatgtaatccggattattgtccctttgcaaaaaattattaccaa
aaacaaaaattagcgatttgggatttattaaataatgggcatttctattcccgtgaacaa
attagtgaagttgcaaagaaatatgaatgttgtccttttgaacttagtcttgatttaagt
ctgtattcagatgtcattgtgtgtgattataattatctatttgatccacaagtctatctg
aaacgcttttttgaattagaagaaacggatagctattttcttgttgatgaagggcataat
cttatttcaagagcaagagagatgtattctaaagcgttaagtctgcaattgattaaagat
tttaaaaagcttttacccaaacatcaccgcaaacatcataaaatactacaacaattcatc
gaatattgtgaggaatcaagaaaacttttaaaagaccgagactatttgtttcaaaaagaa
ctgcctgataaattaattgatttaggttatcgatggagtgaatattttcgagatttttta
ttggaattaaaagacgagattcctacttggttgcaaaatctatattttgatttaatgagt
tttttaaaaatctcggaatattatgatgaccatttttcgtttttagtagaactggttaac
catgagttgcaatttaaaattttctgcttggatcccgctcacttcattaagcagaagttg
gatttcggaaagggtagtgttttgttttcagctactttatcacctgtacaatactatcaa
aatttattagtaggacatacagacgatttaacgtttagacaatctagtccctttaatcag
aatcaatttcaagtattagtagctgattatctaccaatgacttataaatatcgtagccaa
gttgtagattctttatgtgaattgattaaaaaagcgacggatatcaaagcgggtaattat
ttttgctttttcccttctttttcatatatggaagaagtctatcagcgctatatccaattg
tatccagaagctgaggtactcatacaaagtcgtgaattgaaagatgtggagaaggaagca
ttcttggctaattttcaggcacaaaatgagcaagtcgtccttggtttttgcgtgttaggt
ggtgtcttttcagaaggaatagatctaaaaaagaaccgattaattggctcaatcattgtt
tctgttggcttgccacaaatttccaaagaacaagaagaattaaagagatattttgatgag
aaaaatcagcaaggcttttattatatctatcaactacctggatttaataagatgatgcag
gcggcaggcagggtgatccgaactgaagaagaccgaggggtgattctattaatcgatcag
cgctttagtcgtaaggattatatgcagctttatccttcgcattggtcaaaaggtgtagtt
gtgcatgatttatttagtatgttaaatcagttgaaacaattttggtattaa
DBGET
integrated database retrieval system
