Escherichia coli O157 H7 EC4115 (EHEC): ECH74115_0927
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Entry
ECH74115_0927 CDS
T00778
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
ecf
Escherichia coli O157:H7 EC4115 (EHEC)
Pathway
ecf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECH74115_0927 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecf03400
]
ECH74115_0927 (uvrB)
DNA repair and recombination proteins [BR:
ecf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECH74115_0927 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECH74115_0927 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
IF2_N
DUF1844
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACI37185
UniProt:
B5YRL8
LinkDB
All DBs
Position
939257..941278
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPR
FTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccagaggcg
attcgacgtctcgaagaggggctggaagatggcctggcgcaccagacgttacttggtgtg
actggttccgggaaaaccttcaccattgccaatgtcattgctgaccttcagcgccctacc
atggtacttgcgcccaacaaaacgctggcggcccagctgtatggcgaaatgaaagagttc
ttcccggaaaacgcggtggaatatttcgtctcctactacgactactatcagccagaagcc
tatgtaccgagttccgacaccttcattgagaaagatgcctcggtaaacgaacatatcgaa
cagatgcgtttgtccgccaccaaagcgatgctggagcggcgtgatgttgttgtggtcgcg
tctgtttccgcgatttatggtctgggcgatcctgatttatatctcaagatgatgctccat
ctcacggtcggtatgattatcgatcagcgcgcgattctgcgccgactggcggagctgcaa
tacgctcgtaatgatcaagcattccagcgtggtactttccgtgttcgtggcgaggtgatt
gatatcttcccggcagaatcggatgacattgcacttcgcgtggaactgtttgacgaggaa
gtggaacgattgtcgttatttgacccgctaaccgggcagattgtttccaccattccacgt
tttaccatctacccgaaaacgcactacgtcacaccgcgcgagcgcatcgtacaggcgatg
gaggagatcaaagaagagctggccgccagacgcaaagtgctattggaaaacaacaaactg
ctggaagagcagcggctgacccagcgtacccagtttgatctggagatgatgaacgagctg
ggctactgttcggggattgaaaactactcgcgcttcctctccggtcgtggaccgggtgag
ccaccgccgacgctgtttgattacctgcctgccgatgggctgctggtggtcgatgaatct
cacgtcaccattccacaaattggcggcatgtatcgcggtgaccgggcgcgtaaagagaca
ctggtggagtacggcttccgcctgccatcagcgctggataaccgtccgctgaaatttgaa
gagttcgaagcattagcgccgcaaaccatctatgtttcggcgacgccaggtaattatgag
ctggaaaaatccggcggcgatgtggtggatcaggtggtgcgtccaaccggattgcttgat
ccgattatcgaagtgcggccagtggcgacacaggttgatgatcttctttcggagattcgt
cagcgagcggcaattaacgaacgcgtactggtcaccacactgaccaagcgaatggcggaa
gatcttaccgaatatctcgaagaacacggtgagcgcgtgcgttatcttcactcagatatc
gacaccgtcgaacgtatggagattatccgcgacttgcgtctgggcgagttcgacgtgctg
gtggggatcaacttactgcgcgaaggtctggatatgccggaggtttcgctggtggcgatc
ctcgacgccgacaaagaaggcttcctgcgttctgaacgttcgttgatccagactattggt
cgtgcggcgcgtaacgttaacggtaaagcgattctctacggcgataagatcaccccgtca
atggcgaaagcgattggcgaaaccgaacgtcgccgcgagaaacagcagaagtacaacgag
gaacacggcattacgccgcaaggcttgaacaagaaagtggtcgatatcctggcgttgggg
cagaacattgctaaaaccaaagcgaagggcagaggaaaatcgcgaccgattgttgagccg
gataatgtgccgatggatatgtcgcctaaagcgttgcaacagaaaatccatgagctggaa
gggttaatgatgcaacacgcgcaaaatctggagttcgaagaagcggcacaaattcgtgac
cagttgcatcagctgcgtgaattgtttatcgcggcttcgtga
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