Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C4772
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Entry
UTI89_C4772 CDS
T00338
Symbol
hfq
Name
(GenBank) Hfq subunit of RNA-binding homohexamer that affects many cellular processes
KO
K03666
host factor-I protein
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci02024
Quorum sensing
eci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UTI89_C4772 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UTI89_C4772 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eci03019
]
UTI89_C4772 (hfq)
03036 Chromosome and associated proteins [BR:
eci03036
]
UTI89_C4772 (hfq)
Messenger RNA biogenesis [BR:
eci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
UTI89_C4772 (hfq)
Chromosome and associated proteins [BR:
eci03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
UTI89_C4772 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ABE10176
UniProt:
Q1R388
LinkDB
All DBs
Position
4672100..4672408
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AA seq
102 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagatccgttcctgaacgcactgcgtcgggaacgtgtt
ccagtttctatttatttggtgaatggtattaagctgcaaggacaaatcgagtcttttgat
cagttcgtgatcctgttgaaaaacacggtcagccagatggtttacaagcacgcgatttct
actgttgtcccgtctcgcccggtttctcatcacagtaacaacgccggtggcggtaccagc
agtaactatcatcatggtagcagcgcgcagaatacttccgcgcaacaggacagcgaagaa
accgaataa
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