Enterobacter cloacae ECNIH5: ECNIH5_10180
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Entry
ECNIH5_10180 CDS
T03706
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ecli
Enterobacter cloacae ECNIH5
Brite
KEGG Orthology (KO) [BR:
ecli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecli03016
]
ECNIH5_10180
Enzymes [BR:
ecli01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ECNIH5_10180
Transfer RNA biogenesis [BR:
ecli03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECNIH5_10180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Rho_RNA_bind
ODP
Motif
Other DBs
NCBI-ProteinID:
AIX59108
LinkDB
All DBs
Position
complement(2134107..2136041)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
SAVIHTEKERESAEPEALIEPFLTRFVGKVHKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFVEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLARHNLEKEAPDGVAT
KMQDEGLERRDLTALDFVTIDSASTEDMDDALYAEEAADGKMHLTVAIADPTAWIVEGSK
LDEMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRPHEVRPVLACRMTIAADGTIEEDIEF
FAATIESKAKLAYDNVSDWLENTGSWKPESDNIAAQIRLLHRVCQSRSEWRQTHALVFKD
RPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPEEVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKVESVARPQDETTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTDTRFPAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVNIAEVRMETRSIIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactacattcccagacgccc
cgtgcagaaggggtcgtaaaagccacggaaaagggctttggctttcttgaagttgacgga
cagaagagctacttcattccgcctcctcagatgaagaaagtgatgcatggcgaccgcatt
tcggccgttattcataccgaaaaggaacgagagtctgccgagccggaagcactgatcgaa
cctttcctgacccgctttgtcgggaaagtgcataaaaaagatgatcgtctttctatcgta
ccggatcatcctctcctgaaagatgccatcccttgccgcgccgcgcgtggcgttgagcat
gactttgtcgagggtgactgggcggttgccgaaatgcgccgtcatcctttaaaaggcgat
cgcggtttctacgccgagctgacccagttcatcacctttggcgacgaccatttcgtccca
tggtgggtgacgctggcgcgccacaacctcgaaaaagaagcgccggatggcgtagcgacc
aaaatgcaggacgaaggtcttgagcgtcgcgatctgacagcgctggactttgtcaccatc
gacagcgccagcaccgaggatatggacgatgcgctgtatgccgaagaggcagcggatggc
aaaatgcatctgaccgttgccatcgccgaccctaccgcatggattgtcgaaggcagcaag
ctggacgaaatggccaaagtgcgttcgttcaccaactacctgccgggcttcaacatcccg
atgctgccgcgcgagctttccgacgatctctgctccctgcgtccccatgaagtgcgtccg
gtactggcctgccgcatgaccatcgcggctgacggtaccattgaagaagatatcgaattc
ttcgccgccaccatcgaatccaaagccaaactggcttatgacaacgtgtccgactggctg
gaaaataccggcagctggaagcctgaatccgataatatcgctgcgcaaattcgtctgctg
catcgcgtctgccagagccgcagtgagtggcgccagacccacgccctggtatttaaggac
cgcccggactaccgctttgtgctgggggaaaaaggcgaagtgctcaacatcgtcgccgag
ccacgccgtattgccaaccgtatcgttgaagaagcgatgatctccgccaacatttgcgcc
gcacgcgtgctgcgcgacaagttaggctttggcatttacaacgtgcacaccggctttgac
ccggctaacaccgaagcgctggccgccctgctcaaaacccatgacgtccacgtcgatccg
gaagaggtgctgaccctgccaggcttctgcaagctgcgccgcgagctggacgcacagccg
tcaggtttccttgacagccgcattcgccgcttccagtcctttgcggaaatcagcacggag
ccaggcccgcacttcggtctcggtcttgaggcttacgccacctggacctccccgatccgt
aagtacggcgacatggttaaccatcgtctgctgaaagcgatcatcaaagtggaatctgtt
gcccggccacaggatgagactacgttgcagatggcagagcgtcgccgtctgaaccgtatg
gcggagcgtgatgtaggcgactggttgtacgcgcgtttcctgaatgataaggcagggact
gacacccgtttcccggctgaaatcattgacatcagccgcggcggtatgcgcgtgcgtctg
gtggataatggcgccgttgcctttattcctgccccgttcctgcatgccgttcgcgacgaa
ctggtttgtagccaggaaaacgggaccgtgcaaattaaaggcgaaacggtttacaaagtc
actgacgtgattgatgtaaacatcgctgaagtccgcatggaaacccgcagcattatcgcg
cgccctgtcgcctga
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