Enterobacter roggenkampii 35734: LI67_021285
Help
Entry
LI67_021285 CDS
T04878
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
ecls
Enterobacter roggenkampii 35734
Pathway
ecls03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecls00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LI67_021285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecls03019
]
LI67_021285
03009 Ribosome biogenesis [BR:
ecls03009
]
LI67_021285
Messenger RNA biogenesis [BR:
ecls03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LI67_021285
Ribosome biogenesis [BR:
ecls03009
]
Prokaryotic type
rRNA helicases
LI67_021285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKZ75191
UniProt:
A0A0F1EML1
LinkDB
All DBs
Position
1:complement(4333148..4335043)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRESRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcgttt
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgttctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaatgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggatctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccattatggcgcagatcccggacggt
catcagaccgcgctgttctctgccaccatgccggaagcgattcgtcgtatcaccaaacgc
ttcatgaaagaacctcaggaagtgcgtattcagtccagcgtaaccactcgcccggacatc
agccagagctactggtctgtatacggcatgcgtaaaaatgaagcgctggttcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaatgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgttaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgaccattccagaagcggacctgccaaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgccaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcaccgatgcgtcctaagcgtgaattccgtgaccgtgacgaccgcttcgaa
cgtcgtggcgaccgtaacgatcgtggcccacgtggtgaccgtccagagcgtggtggtgaa
gaccgtcctcgtcgtgaacgtcgcgacgcaggcgatatggaactgtaccgcattgaagtg
ggccgtgatgatggtgttgaagttcgtcacatcgttggcgctatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgttcgcctcccactctaccatcgagctg
ccgaaaggcatgccgggtgaagtactgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgccctgaccgtggcggcgaacgt
cgtggcggtggtcgcggtttcggcggcgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggcgagcgccgtgaaagccgtggcccgcgtcgtgaa
gaaggcaccagccgtcgtcgtttcggtgacgcgtaa
DBGET
integrated database retrieval system
