Enterobacter hormaechei subsp. hormaechei: LI64_01405
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Entry
LI64_01405 CDS
T03709
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
eclz
Enterobacter hormaechei subsp. hormaechei
Pathway
eclz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eclz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LI64_01405 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eclz03021
]
LI64_01405 (rpoB)
03400 DNA repair and recombination proteins [BR:
eclz03400
]
LI64_01405 (rpoB)
Enzymes [BR:
eclz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LI64_01405 (rpoB)
Transcription machinery [BR:
eclz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LI64_01405 (rpoB)
DNA repair and recombination proteins [BR:
eclz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LI64_01405 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AJB69290
LinkDB
All DBs
Position
282255..286283
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVIFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVAAKD
YVDESTGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDDEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGTDVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGGLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacattccatatctcctttctatccagcttgactcgttccagaagtttatcgag
caagatcctgaagggcagtacggcctggaagcagccttccgttccgtgttcccgattcag
agctacagcggtaattccgagttgcaatacgtcagctaccgccttggcgaaccggtgttt
gacgttcaggaatgtcagatccgtggcgtgacctattccgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgtaaaagacattaaagaacaa
gaagtctacatgggtgaaattccactcatgacggacaacggtactttcgttatcaacggc
actgagcgtgttatcgtttcccagctgcaccgtagcccgggcgtcttctttgacagcgat
aaaggtaaaacgcactcttccggtaaagtactgtataacgcacgcatcattccttaccgt
ggttcatggctggacttcgaattcgatccaaaagacaacctgtttgtccgtatcgaccgt
cgtcgtaaactgcctgcaaccatcattctgcgtgcactgaactacaccactgagcagatc
ctggacctgttctttgagaaagtgatctttgaaatccgcgacaacaagttgcagatggag
ttggtgccggaacgtctgcgtggtgagaccgcatcgttcgacatcgaagccaacggcaaa
gtgtatgtggaaaaaggtcgccgtattaccgcgcgccacatccgtcagctggaaaaagat
gatatcaaacacatcgaagttccggttgaatacattgcaggaaaagtagccgcgaaagat
tacgttgatgaatcaactggcgagctgatctgcccggctaacatggagctgagcctggat
ctgctggctaagctgagccagtctggccacaaacgtatcgaaacgctgttcaccaacgat
ctggaccatggcccgtacatctctgagactgtacgcgtcgatccaaccaacgatcgtctg
agcgcgctggtcgaaatctaccgcatgatgcgtcctggtgagccaccaactcgcgaagcg
gctgaaagcctgttcgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcattgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggatgatatcgaccacctcggcaaccgtcgtatccgttccgtaggcgaaatggcg
gaaaaccagttccgcgttggactggtacgtgtagagcgtgcggtgaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttctgcg
gcagtgaaagagttcttcggttccagccagctgtctcagttcatggaccagaacaacccg
ctgtctgagattacgcacaaacgacgtatctccgcactcggcccaggcggtctgacccgt
gaacgtgcaggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccaaacatcggtctgatcaactccctgtccgtgtacgcacag
acgaacgaatacggtttccttgagaccccgtatcgtaaagtgaccgacggtgtggttacc
gacgaaattcattacctgtctgctatcgaagaaggcaactacgttatcgctcaggcgaac
tccaacctggatgacgaaggccactttgtagaagatctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggaacacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggccgttccaactctgcgtgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttacggcagtggctaagcgt
ggcggtaccgtacagtacgtcgacgcatcccgtatcgttatcaaagttaacgaagacgag
atgtatccgggcgaagcgggtatcgacatctacaacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccttgcgtatctctgggtgagccagttgagcgcggc
gacgtgctggcagacggtccgtccaccgacctcggtgaactggcgctcggtcagaacatg
cgcgtagcgttcatgccgtggaacggttacaacttcgaagactccatcctcgtctccgag
cgtgtggttcaggaagatcgtttcaccaccatccacattcaggaactggcctgtgtgtcc
cgtgacaccaagctggggccagaagagatcaccgctgacatccctaacgtgggtgaagct
gcgctctccaagctggatgaatccggtattgtttacatcggtgcggaagtgaccggcggt
gacattctggttggtaaggttacgccgaaaggtgaaacccagctgacgccagaagagaaa
ctgctgcgtgctatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccaaacggtgtttccggtacggttatcgacgttcaggtcttcactcgtgatggcgttgag
aaagataagcgtgcgctggaaatcgaagagatgcagctcaaacaggctaagaaagacctg
tctgaagaactgcaaatcctcgaagcgggcctgttcagccgtatctatgcggtgctggtt
gccggtggcgttgaagctgagaagctcgacaaactgccacgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacagaatcagctggaacaactggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgcaaaatcactcagggcgac
gatctggcaccaggcgtgctgaagattgttaaggtgtatctggctgttaaacgtcagatc
cagcctggtgataagatggcaggtcgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactaaaccca
ctgggcgtaccgtctcgtatgaacatcggtcagattctggaaacccacctgggtatggct
gcaaaaggtatcggcgacaagatcaacgccatgctgaaacagcagcaggaagtcgcgaaa
ctgcgcgagttcatccagcgtgcctacgatctgggtaccgacgttcgtcagaaagtcgac
ctgaacaccttcagcgatgaagaagtgctgcgtctggcagagaacctgcgcaaaggtatg
ccaattgcaacgccggtattcgacggtgcaaaagaagctgaaatcaaagagctgctgcaa
ctgggtggtctgccaacgtctggtcagattacgctgtttgacggccgtaccggtgaacag
ttcgagcgtccggtaaccgtaggttacatgtacatgctgaaactgaaccacctggtcgac
gacaagatgcacgctcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggggagatggaagtgtgggcgctggaagca
tacggcgcagcatacaccttgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtactaagatgtataagaacatcgtagacggcaaccatcagatggaaccgggcatgcca
gaatccttcaacgtactgttgaaagagattcgttcgctgggtatcaacatcgaactggaa
gacgagtaa
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integrated database retrieval system
