Escherichia coli SMS-3-5 (environmental): EcSMS35_1260
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Entry
EcSMS35_1260 CDS
T00672
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm02020
Two-component system
ecm02026
Biofilm formation - Escherichia coli
ecm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EcSMS35_1260 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
EcSMS35_1260 (fliA)
09142 Cell motility
02040 Flagellar assembly
EcSMS35_1260 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecm03021
]
EcSMS35_1260 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ecm02035
]
EcSMS35_1260 (fliA)
Transcription machinery [BR:
ecm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EcSMS35_1260 (fliA)
Bacterial motility proteins [BR:
ecm02035
]
Flagellar system
Flagellar assembly proteins
Stator
EcSMS35_1260 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
UPF0122
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
ACB19900
UniProt:
B1LQT4
LinkDB
All DBs
Position
1257728..1258447
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AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactgctggacagtaatctgcgccag
cgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggtgcagtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggctattaaacggttacgcactaaactggggaagttataa
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