KEGG   Escherichia coli APEC O78 (APEC): APECO78_16770
Entry
APECO78_16770     CDS       T02445                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ecoa  Escherichia coli APEC O78 (APEC)
Pathway
ecoa02024  Quorum sensing
ecoa03060  Protein export
ecoa03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ecoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    APECO78_16770
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    APECO78_16770
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    APECO78_16770
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ecoa02044]
    APECO78_16770
Enzymes [BR:ecoa01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     APECO78_16770
Secretion system [BR:ecoa02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   APECO78_16770
  Eukaryotic Sec-SRP protein
   APECO78_16770
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 cobW AAA_30 AAA_16 AAA_31 NAT10_TcmA_helicase nSTAND_NTPase5 AAA_33 AAA_24 APS_kinase T2SSE AIP3 GlnD_UR_UTase AAA_14 TsaE ATP_bind_1
Other DBs
NCBI-ProteinID: AGC88075
LinkDB
Position
complement(3490856..3492217)
AA seq 453 aa
MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtgga
cgcctcactgaagacaacgtaaaagatacgctgcgcgaagtgcgcatggcgctgctggag
gcggacgtcgctctgccggtagtgcgtgagtttatcaatcgcgtaaaagagaaagcggtt
ggtcatgaagttaataagagcctgacgccggggcaggagttcgtcaaaatcgtccgtaac
gaactggttgcggcgatgggcgaagagaaccagaccctgaacctggcggcgcaaccgcct
gcggtcgtgctgatggcgggcctgcaaggtgccggtaaaacaaccagcgttggtaaactc
ggtaagttcctgcgcgagaagcacaagaagaaagtgctggtggtttctgccgacgtttat
cgcccggcggcaatcaaacagcttgagacgctggcagagcaggtgggcgttgatttcttc
ccttctgatgttggtcagaagccggtagacatcgttaacgcggcgctgaaagaagccaaa
ctgaaattctacgacgtgctgctggtggataccgctggtcgtctgcacgttgacgaagcg
atgatggacgagatcaaacaagtccatgcgtcgattaacccggttgaaaccctgtttgtg
gttgacgccatgaccggtcaggatgcggccaatacggcaaaagcattcaatgaagcgtta
ccgcttaccggcgtagtgttgaccaaagtggacggcgatgcccgcggcggtgcggcgctc
tctattcgtcacatcactggcaaaccgatcaagtttctcggtgttggcgagaaaactgag
gcgctggagccgttccatccggaccgcatcgcgtcgcgtattctcggcatgggcgacgta
ctgtcgctgatcgaagatatcgaaagcaaagttgaccgcgcgcaggcagagaaattagcc
agcaagctgaaaaaaggcgacggcttcgatctcaacgattttcttgagcaactgcgccag
atgaaaaatatgggcggcatggctagcctgatgggcaagctgccgggcatggggcagatc
ccggataatgttaagtcgcagatggacgataaagtgctggtgcgtatggaagccatcatc
aactcgatgacgatgaaagagcgcgctaagccagaaatcatcaaaggttcgcgtaagcgt
cgtatcgctgccggttgcggtatgcaggtgcaggacgttaaccgccttctgaagcagttc
gacgacatgcagcgcatgatgaagaaaatgaagaagggcggaatggcgaagatgatgaga
agcatgaaggggatgatgccgccgggatttcctggtcgctaa

DBGET integrated database retrieval system