Ezakiella coagulans: M1R54_07940
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Entry
M1R54_07940 CDS
T08131
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ecou
Ezakiella coagulans
Pathway
ecou03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ecou00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M1R54_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecou03021
]
M1R54_07940
03400 DNA repair and recombination proteins [BR:
ecou03400
]
M1R54_07940
Enzymes [BR:
ecou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M1R54_07940
Transcription machinery [BR:
ecou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M1R54_07940
DNA repair and recombination proteins [BR:
ecou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M1R54_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UQK60456
LinkDB
All DBs
Position
1662797..1666504
Genome browser
AA seq
1235 aa
AA seq
DB search
MVHPVQYGKRTRMSYSRIDEALDMPNLLEVQTESYEWFIKYGIKEVFDDVSPVEDYAGNL
ILEFVDYKLDDKLKYTESEARMRDANYSAGLRAKVRLINKETGEVKEQEVFMGDLPLMTK
TGTFIINGAERVIVSQLVRSPGAYYTSSYDKNGNLQVNAQVIPNRGAWLEYETDTTGSLS
VRVDRTRKVPLTTLLRAFEIESNEDIIEAVGDFEVLQKTFEKDPSKNKSEAVIEIYKRLR
PGEPATEESATSLLYNMFFDYKRYDLAKVGRYKLNKKLGLANRIKNLTLAEDVVDPNTGE
VLYEEGQVLTPEDAKRIEDAGINSVFILHAGKKLKVVGNWCVDTAVFKDKIDLEKYGIKE
KVYYPAMMDILEEEDLEKAVVQNYRKLYPKHILISDVVASVNYELLLFEGVGNTDDIDHL
ANRRIRCVGELLQNQFRIGLSRMERVVRERMTIQDMDYATPQALINIRPLVASIKEFFGS
SQLSQFMDQTNPLSELTHKRKMSALGPGGLSRDRAGFEVRDVHNSHYGRMCPIETPEGPN
IGLMTSLTTYARINEYGFIEAPYRKVRKPEGIVTDEIDYLMADEEDEMVIAQSNEKLDEN
GRFIEDRVVARGHKGIIDVFKREDVDYMDVSPKQIVSVGTALIPFLEKDDAKRALMGANM
QRQAVPLITTEAPIVGTGIEYKAAVDSGVVIIAKNPGIVESVDSTGIVIATDDGKKDSYS
ISKFIRSNQGTTLNQRPIVHEGERVEKGDVIADGPSTNGGEMAIGKNVLIGFMTWEGYNY
EDAILINEKLVVDDVLTSVHIEEYELDSRDTKLGPEEITRDIPNVGEDMLKDLDEEGIIR
IGAEVTSGDFLVGKVTPKGETELAPEERLLRAIFGEKAREVRDTSLKVPHGETGIVVDVR
NYTREAGDELPPGVNRSVRVYVATKRKIMVGDKMCGRHGNKGVISRILPEEDMPYLPDGT
PLQICLNPQGIPSRMNLGQVLEVHLGLAAKKLGIYVETPVFDGANENDIIESLEEAGYPK
TGMIEVRDGRTGLPFDRPATVGYMYMVKLHHMVDEKIHARSTGPYSLVTQQPLGGKAQFG
GQRFGEMEVWALEGYGASHVLQEMLTVKSDDIVGRVKTYEAIVKGENIPEPGIPESFKVL
IKELQSLALDVKVLDENKNEIELKEYLDDEPTDLNEITNEMSSISSYSDYGLEDSDEDEK
EVSLDDLKEQEDDSDESYDYEVDDDLEYFDEDESE
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggtacatcctgtacagtatggtaaaagaacaagaatgagttattccagaatcgacgaa
gctctagatatgccaaatcttttggaagtccaaacagagtcctacgaatggttcataaaa
tatggaataaaggaagtttttgacgatgttagtccggttgaagattacgcaggaaatctt
atactggaatttgtcgattataaacttgatgacaagcttaagtataccgaatctgaagca
agaatgcgtgatgcaaactattccgcagggcttcgtgctaaggttagacttataaataag
gaaacgggtgaagtcaaggaacaagaagttttcatgggagatttacctcttatgacaaag
acggggacttttattattaacggtgctgaaagagttattgtcagccaacttgtaagaagt
cctggtgcttactacacttcaagttatgataaaaacggtaatttgcaagtcaatgcacaa
gttattcctaatagaggggcatggcttgaatatgaaacggatacaacgggaagcttgagt
gttcgtgtagacagaaccagaaaggttccattgacgacgcttcttcgtgcttttgaaata
gaatcgaatgaggatattatagaagcggttggagattttgaagttctacaaaaaacattt
gaaaaggatccttcaaagaacaagagtgaagctgttattgaaatttataaaagactgaga
cctggagaacctgcaacagaggaatcagcaacaagtcttttgtacaatatgttttttgac
tacaaaagatatgatttagcaaaagtcggaagatataagctcaataaaaagttgggctta
gcaaatagaataaaaaatttaacccttgcagaagatgttgtcgatccgaatacaggagaa
gttttgtatgaggaaggacaagttttgacaccggaagatgcgaagagaattgaagacgca
ggaataaattctgtgtttattttgcatgccggaaaaaaacttaaagttgtcggaaactgg
tgtgttgacacagcagtatttaaagacaaaatagatcttgaaaaatacggaataaaagaa
aaagtatattatcctgcaatgatggatattttggaagaagaagatttggaaaaagctgta
gtacaaaattatagaaagctttacccaaaacatattcttatttcagatgttgtggcaagt
gtaaactacgaactgttattgtttgaaggagtgggaaatactgatgatattgaccatttg
gcaaatcgtagaatcagatgcgtcggggaacttttacaaaaccaattcagaattggactt
tcaagaatggagagagttgtaagagaaagaatgacgattcaagatatggactacgcaact
cctcaagctcttattaacatcagacctctagttgcaagcattaaggaatttttcggttca
tcgcaactttcacaattcatggaccaaacaaatccattgtcagaacttactcacaaaaga
aagatgtcagctcttggacctggcggactttcgagagatagagcaggctttgaagtaaga
gacgttcacaactctcactacggaagaatgtgtcctattgaaacgccagaaggcccgaac
atcggtcttatgacttcacttacaacatatgcaaggataaatgaatatggttttattgaa
gcaccatacagaaaggttagaaagccggaaggcattgtaaccgatgaaatagattatttg
atggcggatgaagaagacgaaatggtcatcgcacaatcaaatgaaaaacttgatgaaaat
ggcagatttattgaagatagagttgttgcacgtggacacaaggggataatcgacgtattt
aagagagaagatgtcgattatatggacgtctcaccgaagcaaattgtttctgtgggtaca
gctcttataccgttccttgaaaaagacgacgcaaaacgtgcacttatgggtgcaaacatg
caacgtcaagcggttcctcttatcacaacagaggcacctattgttggaacgggtattgaa
tacaaagctgctgttgactctggagtagttattattgctaagaatcctgggattgtagaa
tctgttgactcaacaggaattgttattgcaacagacgacggaaagaaagattcatattca
ataagcaagtttatccgttcaaaccaaggcacaactttgaatcaacgtcctatcgttcac
gagggtgaaagagttgaaaagggagatgttattgccgacggtccgtcaacaaacggtgga
gaaatggcaatcggtaaaaacgtgcttatcggatttatgacttgggaaggctacaactac
gaagacgctattttgattaatgaaaagcttgttgttgacgacgttctcacttcagttcat
attgaagaatacgaactcgattcgagagatacaaaactcggacctgaagaaattacgaga
gacattccgaatgtcggcgaagatatgctcaaagatttggatgaagaaggcattattaga
atcggtgccgaagtaacatccggagatttccttgttggaaaggttacgcctaagggcgaa
acagaacttgcacctgaagaaagacttttaagagcaattttcggtgaaaaagcaagagaa
gtaagagacacttctttaaaagttccacacggcgaaacaggaattgttgtcgacgttaga
aattatacaagagaagccggagacgaattgccaccgggagtaaatagaagtgtaagagtt
tatgttgcaacaaagagaaagattatggtcggagacaagatgtgcggacgccacggaaac
aagggtgttatttcaaggattcttcctgaagaagatatgccatatttaccggacggcaca
ccacttcaaatttgtttgaatcctcaaggtattccgtcacgtatgaaccttggacaagtt
ttggaagttcacttgggacttgctgcaaagaaactcggcatctatgttgaaacacctgtt
tttgacggggcaaatgaaaatgacataatcgaatcgctcgaagaagcgggctatccgaag
acgggtatgattgaagttagagatggaaggacaggtcttccttttgacagacctgcaacg
gtcggatacatgtatatggttaaactccaccacatggtcgacgaaaagattcacgctcgt
tcaacaggaccatactcacttgttacacaacaaccactcggaggtaaagcacaattcggg
ggtcaaagattcggggaaatggaagtttgggctcttgaaggttacggtgcaagccacgtg
cttcaagaaatgttaactgtaaaatccgacgatattgttggacgtgttaagacttatgaa
gcaattgtaaagggtgaaaatattcctgaaccgggaattcctgaaagtttcaaggtttta
atcaaagaacttcaatccctcgcacttgatgttaaagttttggatgaaaataaaaatgaa
atagaattaaaagagtatttggacgatgaaccgactgacttaaatgaaattacaaatgaa
atgagttcaattagctcttattcagattacggacttgaagattccgatgaagatgaaaaa
gaagtaagtctagatgatttgaaggaacaagaagacgatagcgacgaaagctatgactac
gaagtcgatgatgacttggaatattttgatgaagatgaatcagaataa
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integrated database retrieval system
