Escherichia coli O81 ED1a (commensal): ECED1_3353
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Entry
ECED1_3353 CDS
T00827
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase
KO
K04763
integrase/recombinase XerD
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecq03036
]
ECED1_3353 (xerD)
Chromosome and associated proteins [BR:
ecq03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ECED1_3353 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
HTH_52
Motif
Other DBs
NCBI-ProteinID:
CAR09510
UniProt:
B7MZJ2
LinkDB
All DBs
Position
complement(3304359..3305255)
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AA seq
298 aa
AA seq
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MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggatctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcttaccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaacggctggagggcgggtataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagatgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggtcgaacgt
ttattacaggcaccattaattgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccggactgcgtgtctctgaactggtcgggctgacaatgagtgatatc
agcctgcgtcagggcgtggtgcgggtcattggtaaaggcaacaaagagcgcctggtgccg
ttaggtgaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ttgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgcattaaacattatgccgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccactcacttattaaatcatggtgcggat
ttgcgcgtggtgcagatgctactgggccacagcgatctctccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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