Etheostoma cragini (Arkansas darter): 117935406
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Entry
117935406 CDS
T07493
Symbol
slc8a3
Name
(RefSeq) sodium/calcium exchanger 3 isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04260
Cardiac muscle contraction
ecra04261
Adrenergic signaling in cardiomyocytes
ecra04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117935406 (slc8a3)
04020 Calcium signaling pathway
117935406 (slc8a3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117935406 (slc8a3)
04261 Adrenergic signaling in cardiomyocytes
117935406 (slc8a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117935406 (slc8a3)
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117935406 (slc8a3)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
117935406 (slc8a3)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Others
117935406 (slc8a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
117935406
NCBI-ProteinID:
XP_034713454
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Position
20:complement(5515485..5658170)
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AA seq
925 aa
AA seq
DB search
MEGSRPVKPGSSACLWLGLVSVAVAFLCTEARTTPSPLLTPSNATCAGNSKCHAGIILPI
WYPEDPSMGDKIARVIVYFVAMIYMFLGVSIIADRFMAAIEVITSQEKELVIKRPNGETT
TTTIRVWNETVSNLTLMALGSSAPEIMLSVIEICGHGFKSGELGPATIVGSAAFNMFVII
GLCVSVIPQGEVRKIKHLRVFFVTAGWSIFAYIWLYMILAVFSPNVVQVWEGLLTLAFFP
ICVLLAWVADRRLLFYKFMHKKYRTDKHRGVIIETEAERSKGIEMDGKMVNSHFMDGGAA
SNLIGLPESKEVDESRRDMIRILKDLKQKHPEKEMDQLVEMANYYALSHQQKSRAFYRIQ
ATRMMTGAGNILKKHVAEQAKKSISVQEVHVEEPEEYVSRIAFEPAVYQCLENCGAAILS
ITRKGGDLNKTIYVDYKTEDGSANAGADYEFSEGTVVFKPGEMIKEINIGIIDDDIFEED
EHFFVRLCNLRVLETEDEVLSPNSLPYPKAMLGFPSVATVTILDDDHSGIFTFESSSVHI
SESIGIMEVKVLRTSGARGTVVVPYRTMEGLAKGGGEDFEDTYGELEFKNDETCKLIHVK
IIDDEEYEKNKNFFLELAEPRMVDMSLQKALLLADDVPDRKMTSDEEEARRIAEMGKPVL
GEHSKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWRDQFMEAITVSADEDEDDTGEE
RLPSCFDYVMHFLTVFWKVLFACVPPTDYLNGWACFFISIIIIGLLTAVIGDLASHFGCT
IGLKDSVTAVVFVALGTSVPDTFASKVSAVQDTYADASIGNVTGSNAVNVFLGIGLAWSV
AAIYWHMKGKPFVVEAGSLAFSVTLFTIFAFLAVSVLLYRRRAHIGGELGGSRGHRLATS
AFLFGLWFLYILFCSLEAYCHIEGF
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggagggttcaaggcctgtaaagccagggtcgtcagcctgcctctggttggggctggtc
tctgtggctgtagccttcctttgtacagaagcccggaccactccgagccctctgctaacc
ccaagcaatgcaacctgcgcgggaaactccaagtgtcatgcagggatcatcctgcccatc
tggtatcctgaggatccctccatgggagacaagatcgcacgggtcattgtgtattttgtg
gccatgatctacatgtttctcggagtgtccatcattgctgaccgcttcatggcggccatc
gaggtcatcacctcccaggagaaggaactcgtcatcaaaaggcccaatggagaaacaacc
accaccacaattcgggtgtggaacgaaacggtctcgaacctcaccctcatggccttgggc
tcgtccgcccctgagattatgctctctgtaatagagatctgtggacatgggttcaaatct
ggtgagctcgggcctgccacaattgtcggcagtgcggccttcaatatgtttgtcatcatt
ggcctctgtgtgtcggtcattccccaaggagaggtacgcaagatcaaacacctcagagtg
ttctttgtcactgcaggctggagcatttttgcttacatctggctctacatgattctggct
gtgttttctcccaacgtagtccaggtctgggagggtctcctcacactggccttcttcccc
atatgtgtactccttgcatgggtagcggacagacgactgctcttctacaagttcatgcac
aagaagtatcgcaccgacaaacacaggggtgtgatcatcgagacggaggcagaacgctcc
aaggggattgagatggacggcaagatggtcaactctcacttcatggacggaggggcggca
agcaatcttattggtctgcctgagagcaaagaggttgacgagtcccggcgcgacatgatc
cgcatcttgaaagacctgaagcagaagcaccccgagaaagagatggatcagctggttgag
atggccaactactacgctctctcccaccagcaaaagagccgtgccttctaccgcattcaa
gctacacgcatgatgacgggcgcgggaaacatcctgaagaaacacgtcgcggagcaggcg
aagaagagcatcagcgtgcaggaggtgcacgtggaagagccagaagagtacgtgtctcga
attgcgtttgagcctgccgtctaccagtgcctcgagaactgtggcgccgccattctgtcc
atcaccagaaagggtggcgacctcaacaagaccatttatgtggattataagactgaagat
ggctcggctaacgctggggccgattacgagttctcagagggtacagtagtgttcaaacca
ggagagatgatcaaggaaataaacattggcatcatagacgacgacatctttgaagaggac
gagcacttttttgtccggctctgtaatctgcgtgtcctggagacggaggacgaggtgctg
tcccccaacagtctcccatacccaaaggccatgctgggcttcccctccgtggccaccgtg
accattctggatgacgatcattcgggcatcttcacctttgagagcagctcggtgcacatc
agtgagagcattggtattatggaagtgaaagtgctaaggacttctggagcaagggggaca
gtcgttgtgccttatcgcaccatggagggtctcgccaaaggaggaggggaggactttgaa
gacacttacggagagcttgagttcaaaaacgacgagacctgcaaactaattcacgtgaaa
attattgacgacgaggagtatgagaaaaacaagaacttcttcctggagctggccgagcct
cgcatggtagacatgagtctgcagaaagccctgttgttagcagacgatgtaccagacaga
aagatgacatcagacgaggaggaagccaggcggatcgcagagatgggaaaaccagtgctg
ggggaacactccaagctggaagtcattattgaggaatcgtacgagtttaagagcacagtg
gacaagctgatcaagaagaccaacctggccctggtagtgggaaccaactcctggagagac
cagttcatggaggccattacagtcagtgcagatgaggatgaagatgacacaggggaagaa
cggctgccgtcatgtttcgactacgtcatgcacttcctcaccgtcttctggaaggtcctg
tttgcttgcgttcctcccacagactatctgaacggctgggcctgtttcttcatctccatc
atcatcatcggcctgctcacggccgtcatcggcgacctggcgtctcacttcggctgcacc
atcggcctcaaggactcagtcactgctgtggtgtttgtggcactcggcacatctgtccca
gacaccttcgccagtaaggtatcagcagtccaggacacctatgcagacgcctctatcggg
aacgtgaccggaagcaacgccgtcaacgtcttcctgggaatcggcttggcctggtcggtg
gcggctatctactggcacatgaaagggaagccgtttgtagtggaagccggctcgctggcg
ttctctgtcactctcttcaccatcttcgccttcctggccgtgtcggtgctgctctaccgg
cgccgggcccacatcggaggagaactgggcgggtcccggggacacagactggcaacgtca
gccttccttttcggcctctggttcctctacatcctcttctgcagtctggaggcctactgt
catatagagggcttctaa
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