Etheostoma cragini (Arkansas darter): 117938262
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Entry
117938262 CDS
T07493
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117938262
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117938262
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF3807
TMEM214
CDC45
Zip
RR_TM4-6
DDHD
PFF1_TM
CLN3
Motif
Other DBs
NCBI-GeneID:
117938262
NCBI-ProteinID:
XP_034718674
LinkDB
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Position
22:complement(7975356..8001999)
Genome browser
AA seq
784 aa
AA seq
DB search
MFGKLKLLLSGPQVPAASGTLAPAKEEKENEAKNVGKPQAPAPAAAPAAPAPAAPAAPAM
AAPAAAPDAPAPASPAAPAMAAPAAAPDAPAPASPAPAALAAPAAPAMAAPAAAAVAVAP
APAAPTPAPAAAAAAPANPDQAGPEGQEAAPPPPPPIVINKYSDEQLRTIVKSMRDRLQL
YRQKVEDQYATSPEISPPVTPVLLKDNYTKVIEERKSQAEEERIKKEEAEKKKKEEQEKK
KQEAEQKKKEEEEKKKAEVKDEKKEEKSMKAKLTEATWYWMDVVLMPIEDKMDSVLGKTI
DPFTDRRYIAWLSLVTLAFNYNTWLITARLCFPYHTESSIPYWFAVDMVADFIYLTDAIL
FQARKQFVKAGDIMKDRMVTRKYYRASERFMMDVVCLIPFDLLYLQFGFKSIFRANRLLK
AGTFFEFSDRLESIMAKAYIWRVIRTIGYLLFMLHLNACFYYVASEYQGIGSTKWVYSGL
GSAYLRCYYFAVRSLINIGGLNEPHTVFEITFQMTNFFTGVFVFSSLIGQMRDVIGAATA
GKTYFRASMDGTVAYMVTNHIPGMVQSRVRTWYTYTWDAQGMLDESELLDKMPLVMRTAI
AVDINLSTFQKIDLFKGCDQQMLVDMLLRLKSIIYLPGDFVVKKGDIGKEMYIIKSGAVQ
VVGGPDNSIVFVTLKAGCVFGEISLLQSSKDGGNRRTANVKAHGFANLFVLEKKDLFDIL
VHYPESQKVLARKGRKLIKAKGPATAKAVEEKPKGLTLFGTKPQTPKLIKLFHNMKKGIN
KSTG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaagttaaagctcctcctgagtggccctcaggtgccagcggcttcagggact
ctagctccagccaaggaggagaaggagaatgaggccaagaatgtgggcaaaccgcaagcc
cctgccccagcagcagccccagctgccccagccccagctgccccggctgccccagcaatg
gcggccccagcagcagcccctgatgccccagccccagcttccccggctgccccagcaatg
gcggccccagcagcagcccctgatgccccagccccagcctccccagccccagctgcccta
gctgccccagctgccccagcaatggcggctccagcagcagctgcggtggcggtggccccg
gccccagcagcccctactcctgctccagcagcggccgcagcagccccagctaaccctgat
caagctggacctgagggccaagaagcggcccctcctccacctccacccatcgtcatcaac
aagtattcagacgagcagctcagaaccatcgtcaagtcaatgagagacagactgcagctc
tacaggcagaaagtggaggatcagtatgctacgtcccctgagatcagcccacccgtcaca
cctgtgctgctcaaagacaattacacaaaagtcatagaggagaggaaaagccaagcagag
gaggagcggataaagaaggaagaagctgagaagaagaagaaagaagagcaggagaagaaa
aagcaggaggccgagcagaaaaagaaggaggaggaagagaaaaagaaagcagaggttaaa
gatgaaaaaaaggaggagaagagcatgaaggccaagttaactgaagctacctggtattgg
atggacgttgttctgatgccaattgaagacaaaatggactcagtgctggggaagaccatc
gacccttttacagaccgtcgctacatcgcctggctgagtctggtgactctggccttcaac
tacaatacctggttaatcacggcccgtctgtgtttcccgtaccacacggaaagctccatc
ccttactggttcgccgtggatatggtggccgacttcatctacctcacagacgccatcctc
ttccaggcccgcaaacagtttgtcaaagcaggagacatcatgaaagacagaatggtgaca
aggaagtactacagagcttcggagagattcatgatggacgtggtgtgcctcataccattc
gacttgctgtacctccagtttggatttaaatccatttttagagccaatcgtctgctgaag
gcaggtacattttttgagttcagcgatcgtctagaaagcatcatggccaaggcttacatc
tggagagtgattcggaccatcggatatcttctcttcatgctccacctcaacgcctgcttc
tactatgtagcttcagagtaccagggcattgggtcaactaaatgggtctactccggtctg
ggcagcgcgtacctgcgttgttactactttgctgtccgcagtctgatcaacatcgggggt
cttaacgaacctcataccgtctttgagattacctttcagatgactaactttttcacgggc
gtctttgtgttctccagtttgattggacagatgagagacgtcattggtgcagccacagca
ggaaagacctacttccgagcctccatggacggcaccgtggcctacatggtgaccaaccac
atccccggtatggtgcagagccgggtccgcacctggtacacctacacctgggacgctcag
ggcatgttggatgagtccgagctgctggataagatgcctctggtgatgagaactgccatc
gctgttgatatcaacctatccacctttcagaagatcgatcttttcaagggctgtgaccag
cagatgttggtggacatgttactgaggctcaaatccatcatctatctacctggagacttt
gtcgtcaagaaaggggacatcggtaaagagatgtacatcattaaaagtggagcggtgcag
gtggtgggaggacctgacaacagtattgtgtttgtcacactgaaggctggctgtgtgttt
ggagaaatcagtctgttgcagtcatccaaagatggagggaacaggcggacagctaatgtc
aaagcccacggcttcgctaaccttttcgtcctggagaagaaagacctgtttgacatcctg
gtccactatccagagtctcagaaagtgttggccaggaagggaaggaaactgatcaaggcc
aaaggcccagcaaccgcaaaagctgttgaagaaaagccgaaaggtttaaccttgtttgga
acaaagccccaaacacccaagttaataaaactcttccataacatgaagaaagggatcaac
aagtcgacaggttga
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