Etheostoma cragini (Arkansas darter): 117941901
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Entry
117941901 CDS
T07493
Name
(RefSeq) sodium/calcium exchanger 2-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04020
Calcium signaling pathway
ecra04260
Cardiac muscle contraction
ecra04261
Adrenergic signaling in cardiomyocytes
ecra04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117941901
04020 Calcium signaling pathway
117941901
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117941901
04261 Adrenergic signaling in cardiomyocytes
117941901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117941901
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117941901
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
117941901
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Others
117941901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
DUF4843
Motif
Other DBs
NCBI-GeneID:
117941901
NCBI-ProteinID:
XP_034723011
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All DBs
Position
3:27996380..28084164
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AA seq
981 aa
AA seq
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MSLLASPFLLLLLLFLLPLPPCLSESQRIDSSSEPDFPAVSPSLFPSSYPPPSMSYANST
APEKKEKCGDVAMCKPGILLPVWEPNRPGLGQQVARAVVYFASLMYMFLGVSIIADRFMA
SIEVITSQEKEVTITMPNGETSVATVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHGF
HAGDLGPGTIVGSAAFNMFVIIGICVWTIPDGQTRKIKHLRVFFITAFWSIFAYIWLYLI
LSVITPGIVEVWEALVTLLYFPVCVILAWIADRRLLFYKYMGKRYRADKRHGIVVETEGD
LTPNKGGMEMIIDGKFPTRGGTALPAENCGGGTQDGTAGAASNNIGGGGNLPNSSSAMVN
VESSRELDESRKEVIRIIKELKQKYPDKELDQLVELANYYALLHQQKSRAFYRIQATRMM
IGAGNVLKKHAADNARRTAVTDEEAPEEEDLGTCSRISFESAHSQCMENCGFVTLAVVCQ
GGLGENTFYVDYRTEDGSANAGSDYEYCEGTLVFKPGETRRDIKVGIIDDDIFEEDEHFF
VRLLNLRIGDAEGMFESDEVGSAPKARFVEPLVAMVTILDDDHAGIFTFSENTVRVSESV
GTMEVTVVRNSGARGTVILPYYTESGTAKAGEDYEEARGELEFTNDQTTQTFQVRIIDDE
EYEKHENFFIVLEEPRWLKRGISALLLNQEGAEGQMSAEEEEARKIAEMGKPILGEHSRL
EVVIEESYEFKSTVDKLIKKTNLALVIGTHSWREQFVEAVTVSAGDGDDDEEGREERPPS
CYDYFMHFVTVFWKVLFACVPPTEYWNGWACFLVSISVIGLLTAFIGDLASHFGCTVGLR
DTVTAVVFVALGTSIPDTFASKVAAMQDQHADASIGNVTGSNAVNVFLGIGVAWSVASIY
WKIKGKEFEVDPGSLAFSVTLFTIFAFVCMGVLMFRRRPSIGGELGGPKGARVITSLLFL
GLWFLYILFSSLEAYCHISGF
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcttggcctcccccttcctcctcctcctcctcctcttcctcctcccactgccc
ccctgcctgtcggagtcccagcgcatcgactccagcagcgagcccgacttcccggcggtc
tcgccctccctgttcccctcctcctatcctcctccttccatgtcttacgctaacagcacc
gcgcctgagaagaaagagaagtgtggcgatgtggcgatgtgcaagcccggcatcctgctg
ccggtctgggaacccaaccggcccgggctcggccaacaggtggccagggctgtggtctac
ttcgcgtccctcatgtacatgttcctgggagtgtccatcatcgcagaccgcttcatggcg
tccatagaggtcatcacgtcccaggagaaggaggtgaccatcaccatgcctaacggggaa
acatcagtggcgacggttcgaatctggaacgaaacagtgtccaatctgacactcatggct
ctcggctccagcgctccggagatactgctgtctgttatagaggtgtgcggccacggcttc
catgccggggacttgggcccaggaaccatcgtcggcagcgccgccttcaacatgtttgtg
atcatcgggatctgcgtgtggacgatccccgacgggcagacccgcaaaatcaagcacctc
agggtgttcttcatcaccgccttctggagcatcttcgcctacatctggctctacctcatc
ctgtccgtcataacgccaggcatcgtggaggtgtgggaggctctggtgaccctgctgtac
ttcccggtgtgtgtcatcctggcttggatcgccgaccgccgcctactcttttacaagtac
atgggcaagcgctaccgtgccgacaagcgccacggcatcgtcgtggagaccgagggagac
ttgacacccaacaagggtggcatggagatgatcatagacggcaagttcccaacgcgaggg
ggcaccgcacttcccgccgagaactgtgggggcggaacccaggacggcacagcgggcgcc
gcatccaataacatcggtggggggggcaacctgcccaactccagcagcgcgatggtcaac
gtggagagcagcagggaactggacgagagccgcaaagaggtgattcggatcataaaggag
ctgaaacagaaatatcccgacaaagagctggaccagctggtggagctggccaactactac
gccctgctgcaccaacagaaaagcagagccttctaccgcatacaggcgacccgcatgatg
atcggagctggaaacgtcctgaagaagcacgctgccgacaacgctcgccgcacggccgtg
accgacgaggaagccccagaagaagaagacctggggacatgcagccgcatctcgtttgaa
agtgcccacagtcagtgcatggagaactgtggctttgtgacactggctgtagtctgccaa
gggggtctgggagagaacaccttctacgtggactacaggacagaggacggttcagccaac
gcggggtcggattacgagtactgcgaaggaacgctggtgttcaaacctggagagactcgc
agagacattaaggtcggcataatcgacgacgacatcttcgaagaggacgagcacttcttc
gtgcgcctgctgaatttgcgcatcggcgacgcggaggggatgttcgagagcgacgaagtg
ggctccgcccccaaggctcgctttgtcgagcccctggtagcaatggtgaccatcctggac
gacgaccacgccggcatcttcacgttcagcgagaacacggtgcgggtgagcgagagcgtg
ggcacgatggaggtgacggtggtgcgcaattcaggggcccgtggcaccgtcatcctgccg
tactacaccgagtccggcaccgccaaggccggggaggactacgaggaggccagaggagag
ctggagttcaccaacgaccagactactcagactttccaggtgaggataattgatgatgag
gaatatgaaaaacatgaaaacttcttcatcgtgttggaggagccacgctggcttaagaga
ggaatctcagctctgctgctcaaccaagagggcgcggaggggcagatgagtgccgaggag
gaagaggctcgcaagatagccgagatggggaagccgatcctgggagagcacagccgcctg
gaggtggtcatcgaggagtcctacgaattcaagagcaccgttgacaagctaattaagaag
accaacttggctctggtgatcggcacacactcctggagggagcagtttgtggaggcggtc
actgtcagcgcaggcgacggcgacgacgacgaggagggtcgtgaagagcgcccgccatct
tgttacgactacttcatgcacttcgtcaccgtcttctggaaggttctgttcgcctgcgtc
ccgcccacggagtactggaacggctgggcctgcttcctagtctccatctccgtcatcggc
ctcctcaccgcgttcatcggggatctggcgtcacatttcggctgcaccgttgggctccgg
gacaccgtcaccgctgtggtgttcgtggcattgggaacttctattccagacacctttgcc
agcaaagtggccgccatgcaggaccagcacgcggatgcatccattggtaacgtcaccggt
agcaacgctgtcaacgtgttccttgggatcggcgtggcgtggtcggtggcgtccatctac
tggaaaatcaaaggaaaggagttcgaggtggacccggggtcgctggccttctccgtcaca
ctcttcaccatcttcgcttttgtctgcatgggggtgctgatgttcagacgccggccctcc
atcggcggagagctcggcggcccaaagggggctcgcgtcatcaccagcctgctgttcctg
ggtctgtggttcctctacatcctcttctccagcctggaggcttactgccacatcagcggc
ttttaa
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