Etheostoma cragini (Arkansas darter): 117943033
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Entry
117943033 CDS
T07493
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117943033 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117943033 (slc6a11b)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117943033 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117943033
NCBI-ProteinID:
XP_034724814
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Position
4:complement(17975431..17998080)
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGRDPEGSSSSLDHREYNERGHWNNKVEFFLSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYVVILAWAIFYLFNCFTTELPWAGCGHYWNTENCVDYYGENSTNITNPN
GTSPVIEFWERRVLKISDGIEHIGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYAMLLVLLIRGVTLPGAYEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRRGYRREL
LILGMSLVSFFIGLIMCTEGGMYVFQLFDSYAASGMCLLFVAIFESICIGWVYGSDRFYL
NIEDMIGYKPVFFIKWCWMILTPGICAAIFLFFLIKYKPLKYNNVYTYPDWGYGIGWFMA
MSSMVCIPVGIIWMIWKTPGTFSERMKKLTTPSPDLIMRGKLAALSPYAANDAKLKVDGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagcgggcccgttataaacggtaaaccagaggatggcagagaccct
gaagggtccagctccagcctagaccacagggaatacaatgagaggggccactggaacaac
aaggtcgagtttttcctgtctgtggctggagagatcattgggctgggcaatgtctggagg
tttccttacctctgctacaagaatggaggaggtgcgttcttcgttccatatgtcatcttc
tttgtgtgctgcggtatccccgtgtttttcctggagactgccctgggtcagtttaccagt
gagggaggcatcacttgctggaggaaagtttgcccgctattcgagggtattggctatgca
acgcaggtgattgaagctcatctaaacgtatactacgtagtgatccttgcctgggccatc
ttctacctcttcaactgcttcaccaccgagctgccatgggctggctgtggccactactgg
aatacagagaactgtgtggactactatggagaaaattccaccaacattacaaaccccaac
ggaacctctccagtcattgagttttgggaacgtagagtactgaagatatcagatggtatt
gagcacatagggggaatgcgctgggagctagccatgtgtctggcccttgcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtgacagct
acatttccttatgccatgctgttggtcctgctgatcagaggagtgacactgccaggagca
tacgaaggcatcaagttctacctctacccggacatttcacgtctctctgaccctcaggtg
tgggtggatgcaggaacccaaatcttcttctcctatgccatctgcttggggtgtctcact
gctctaggaagttacaattcctacaacaataactgctacagggactgcatcatgctgtgt
tgtctgaacagcggcaccagctttgtagcaggttttgctatcttctctgtgctgggcttc
atggcctatgaacaaaatgttcccatcgaggctgtggcagaatctggtcctggtcttgca
tttattgcgtaccccaaggctgttactatgatgcctctgtctccactttgggcctgtctg
ttcttcatgatgctcatcttcctcggcctagacagtcagtttgtgtgtgtggagagttta
gtgacagctgtggtagacatgtacccagagaccttcaggagaggctaccgcagagaactg
ctgattctgggcatgtctttagtctccttcttcataggactcatcatgtgtacagaggga
gggatgtacgtcttccagttgtttgactcgtacgctgccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtattggctgggtgtatggtagtgacagattctaccta
aatattgaggacatgattggctacaaacctgtcttcttcatcaaatggtgctggatgatc
ctgaccccgggcatctgtgctgcaattttccttttcttccttattaaatacaaaccactg
aagtacaacaacgtgtacacctaccccgactggggctatggtatcggctggttcatggcc
atgtcctcaatggtctgcatccctgtggggataatctggatgatctggaagactcctggc
accttctctgagagaatgaagaagttgacaactcccagcccggacctgataatgagagga
aagctcgctgcactcagtccttacgctgccaatgatgcaaaacttaaggttgatgggaaa
atatccaccatctcagagaaggagacgcatttctaa
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