Etheostoma cragini (Arkansas darter): 117944442
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Entry
117944442 CDS
T07493
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117944442 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117944442 (ttc37)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
117944442 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_14
TPR_16
TPR_17
TPR_11
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_7
TPR_15
PknG_TPR
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
117944442
NCBI-ProteinID:
XP_034727136
LinkDB
All DBs
Position
5:28777003..28795477
Genome browser
AA seq
1568 aa
AA seq
DB search
MSSKEVKAALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
TAYKKAVELEPEQLLAWQGLSNLYEKTDQWDFKVELPNIYQKLVELYASSDKNKCYEMIT
KLSEIYQSEKDYLKLAKVWLQLIQVKEEEAVDKKELLQLWLQMTQLLSDCINEEEKDNET
QQHLITAFEKAMVLVEPVPGEEHKKLSADYVKCLSKLPQEEAKTKQACQSMLSLYPNQSY
PLEVLGSYYLKKGVLNEDAVSCFSLLLDLAPDSGLGHLGLGTKALQEGRFKDATKDLTQG
LKKMSSSTGWCSLAEAQFKMQRYSDSAVSCSQGLTACVCGEKELRVKLLRLKLEALARSG
GEVAADQALETFSQIPDAEKDPSLVSLRGRAYLNKGQVDEAYKISSELVASNPNLPQGLV
LRGLAQLAQGQPQLAEESFLKAAGQSPDCGEYYFLLGKLYWDMGVETRKDRSKAHTHLLK
AAKFDPHLGCVFRYLGHYYREVANDHGRARGCYKKAFEMDNNDAESGAASVDLSMEQDDM
DTALAILQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAVADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLEITAKQDY
VPALKGLGECQLSLAKCLMEDCRDGGAIDLIQQAIQNLFRAVVLRPDLSCLWKLLGDACT
AVSTVSSNRAQVLVPALLAGLDTNTQSQALNQAQTLRVGERCYVRALKLMSEVPSLWYDL
GLNYYRQSSVHRPDKGEQNSQSLLLEKAQQCLKKAIMMDSGAHSHWNALGVISMSKGLEN
FALAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAFWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPDAFIMLGYMNEHLQLKRQAVQAYKRAVDLLQSMSSSEQLAFA
LCSYGRALCTSGQLEEAVRVYNSTPLQELSDLAGLALVYCRAGLIPESISAYERALAVAS
IEEEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPIAESLLCLCALGLVHSDATLAA
AALTELLKQGSASGKVTEQRCLLTCALLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
LIPQYYPKKANGGAMAGHVACLSSMTQGKRALLYSGVNQLASGRHSVENSHRNALKTMQR
AVLLCPDDPAAWAGLMAACHTENTSCYLSGSAPGRQGLEQTLMSVVSEKVHNVEEIERPL
AQTLEGWVLQQAVSGLTLGGQLEQAEALCTQVLNVSPEHPAVMLSLRQVQCQRLLLASGG
TALPDSVLEQLNNAVMINPTNLGAWHWLAEVYRSQGLLVQAVQAYRQSLQLASQLGLHSS
QVASLLRLALLALEPCLAGVPRKDWTDMILEATTEVLKLGLSPMALLFQALLQYVTKMAA
RETRRLLERLVYSQDFPVTVVQVASWYLLRHLHAKNDQELMNVLLQHAKMNGDQRLLEFY
SLLASPST
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaagaagtgaaagcagcactaaagagtgccagagaggccatcaaaaacaaa
gagttcaaagaggctctaaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcatgggtattcatcggcttggcagccagtgaactcgagcaaccagatcagtcccag
acagcctacaaaaaagctgtggagctggagcctgagcagcttctggcatggcagggcttg
tcaaatctttatgaaaagactgatcagtgggattttaaagttgagctacctaatatctac
cagaagcttgttgagctgtatgcaagctccgacaaaaataaatgttatgagatgatcact
aagctgtcagaaatctatcagtctgaaaaagactatttaaagttggcaaaggtttggctg
cagctcattcaggtgaaggaggaagaggctgtggataagaaagagctactgcagctatgg
ctacagatgacacaactgctctcagactgcattaatgaggaagagaaggacaatgaaact
caacagcatttaatcacagcatttgaaaaggccatggttctcgtggaacctgttccagga
gaggaacacaagaagctctcagctgactatgtcaaatgcctttctaaactgccacaagag
gaagccaaaacaaaacaggcttgtcagtccatgctgtctctctaccccaaccaaagttat
cctcttgaagtccttggctcttactacctcaaaaaaggtgttttgaatgaggatgcagtc
agctgtttctccctgctcctggatctggccccggacagcggattgggtcacctgggcctg
ggaaccaaagccctgcaagaaggaaggtttaaagatgccactaaggaccttacacaaggg
ttaaagaaaatgagctccagcacaggatggtgcagtctggctgaagctcagtttaaaatg
cagagatactcagacagcgctgtgtcgtgctcccaaggtctgacagcgtgtgtttgcgga
gagaaggagctgagggtcaaactgctgaggctgaagctagaagctttagccaggagtgga
ggagaagtggctgcagaccaggctttggagacattctcacagatcccggatgcagaaaag
gacccatctctagtttccctgagaggacgtgcatacctcaacaagggacaagttgatgaa
gcatataagatctcatcagagctggtggcctctaacccgaacctgccccagggcttggta
ctgagaggactggcacaattggctcaggggcagccacagctggcagaggagagtttccta
aaggcggcgggccagagcccagactgtggagagtattatttcttgctgggaaaactctac
tgggacatgggagtagagactcgtaaggaccggagcaaagcccacacacatttgctcaag
gctgcaaagtttgacccacaccttggttgtgtattccgctacctcggacattattaccgg
gaggtggcaaatgatcatggccgggcgcgaggctgctataagaaggcctttgagatggac
aacaatgatgcggagtctggagctgcctcggtggatctgagcatggagcaggacgacatg
gacactgccttagcaatactccagtcagtgattgagaaggccacccccgggtcagcgaaa
tgggcctggatgagacgaggtctgtactacctgaaggttggggagcatcaacaagctgta
gctgatctgcaggcagctctgagagcagaccccgaggactgggtgtgttgggagtgttta
ggcgaggcgtacttgaaccgtcggagcttcacagcagctctgaaggcctttggtaaggcc
catcagctccagccctcctccatctacagtgtctaccaggctgctgccatcaaacagacc
ctgggcaagttcaaagaggccgttgcagagtacttggagatcacagcgaagcaggactat
gttcctgctcttaaaggtcttggagagtgccagctgtctctggcaaaatgtttaatggaa
gactgtcgagatgggggagccattgacctcattcagcaagccatacagaacctcttccga
gctgtggtgctgcgtccagacctgtcctgtttgtggaagctgttgggagatgcttgcacc
gcagtcagcactgtgtcgtcaaacagagcccaggtcctggtgcccgccctgctggctggt
ttagataccaacacccagagccaggcactgaaccaggcccagaccctcagagttggtgag
aggtgttatgtccgtgctttgaagctgatgtctgaggttcccagcctttggtatgaccta
ggactcaactactaccgccagtccagcgtacacagacctgataagggagaacagaactcc
caatctctgctcctagagaaggcccagcagtgtttaaaaaaggctattatgatggacagt
ggggcccatagccactggaatgccctgggagtgatttctatgagcaaaggtctcgaaaac
tttgctctggcgcaacattgcttcatcaagtccatacaagttgagccaaataatgttgtt
gcttggaccaaccttggtaccctttatttgaaaaaggacaatatagagcttgcacatgag
gccttcaagattgcccaatcgctggagccgctttatgtcaactgctggattggccaggcg
ctgatagcagagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcagcacacatatggagggagtgaagggctatgccttctgggtatgttccaccctgctt
gataagagcaacagagactcggaactatatcgctacaacatagtccagatgaatgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgatgcc
ttcattatgctgggctacatgaatgagcatctgcagctgaagaggcaagccgtacaggct
tacaaaagagctgttgatctgcttcagtccatgtcctcatcggaacaactggcctttgct
ctgtgtagctatggccgggctttgtgcacctcaggccagttggaggaggcggtgcgtgtt
tataattccactccactgcaggagctcagtgatctggctgggctggctctggtctactgc
agggccggactcatcccagaaagcattagcgcctatgaacgtgccttggcggtggcttcc
attgaggaggaaaaggcatacatcttgaccgctctggcgctgcttcaacaccggcagggt
aacctagactcagccaagactctgctgtttaaatgctcgatgttaaaggagccaattgca
gagtccttgctgtgtttatgtgccctgggattggtccacagtgatgccacactagctgct
gcggccctgactgagcttttgaaacagggttcagcctcagggaaagttaccgagcagcgg
tgtctgctcacctgcgccttgctcgccctgcagggcaactacagcgcagtgcaaagagag
gcttccagggctgtacacagcaatcctggaaacccatctctgtgggccctgttgtcaagg
ctgataccgcaatactaccccaaaaaggcaaatggcggagcgatggctggccatgttgcc
tgtctctccagtatgacccaaggaaagagggcgctgctgtacagtggagtgaaccagctg
gctagtgggagacactccgtagagaacagtcacagaaatgcactgaagacgatgcagaga
gctgtgctgctttgtcctgatgatccagcagcctgggcgggattgatggctgcctgtcac
acagaaaacacttcgtgttatctttcaggttctgctcctggcagacaaggactggagcaa
accctcatgtcagtggtttctgagaaagtgcataatgtggaagagatagagcgccctcta
gcccagactctagaaggctgggtactacaacaggcggtctctggtctcacgctgggggga
cagctggaacaggcagaagctctctgcacacaggtgctgaatgtttctcccgaacaccca
gcagtgatgctgtcactgagacaggtgcagtgtcagcgcctccttttggccagtggtggt
actgccctcccagactccgtactggagcaactaaacaacgcagtgatgatcaaccctacc
aaccttggggcgtggcattggctggcggaggtgtatcgcagccagggcctgctggtccag
gcagtccaggcttacaggcagagtctgcagctagcctcacagctcggcctgcacagcagc
caggtagccagcctgctgcggctagccctgctagccctagaaccctgtctggcgggggtc
ccaagaaaggactggacggacatgattttagaagccaccactgaagtcttgaagctgggt
ttgtcgcctatggccctccttttccaggccctgctccagtatgtgaccaagatggctgct
agggaaacaaggcgtttgttggagagactggtgtactctcaagacttcccagtgaccgtg
gtgcaggttgccagctggtacctcctccgacacttgcatgccaaaaacgaccaggagcta
atgaatgtccttttgcaacatgccaaaatgaatggagaccaaagactgctggagttttat
tcactgcttgcctctccttcaacctga
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integrated database retrieval system
