Etheostoma cragini (Arkansas darter): 117945088
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Entry
117945088 CDS
T07493
Name
(RefSeq) nucleolysin TIA-1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117945088
03041 Spliceosome [BR:
ecra03041
]
117945088
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117945088
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117945088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
117945088
NCBI-ProteinID:
XP_034728239
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Position
5:134657..146412
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AA seq
388 aa
AA seq
DB search
MMEDDQPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHA
AASLAAMNGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYESNSKHLSFDEVVNQSSPSNCTVYCGGVSTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFVRFNSHESAAHAIVSVNGTSIEGHIVKCYWGKETPDMMNPMQQMPMPQQNKMSFPAA
AQPYGQWGQWYGNGPQISQYVPNGWQVPTYNVYGQAWNQQGFNHLPASAGWTGMSAISNG
GVMEPTQGLNGSMLANQPGMGAAGYPTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgatcaacccagaaccttgtatgtggggaatctgtccagggatgtcacc
gagcccctcattctgcaggtcttcacacaaataggaccctgcaagagctgtaaaatgata
gttgatacggctggaaatgatccgtactgctttgtggagttctatgaccacaggcatgct
gctgcctcattggcagccatgaatggaaggaaaataatgggtaaggaggtcaaagtcaac
tgggccacgacgccaaccagccagaaaaaagacacaagtaatcactttcacgtcttcgtt
ggagacctcagcccagaaataactacagaagacgtcaaagctgctttcggtccattcggc
aggatatcagatgctcgtgttgtgaaagatatggctacagggaaatctaaaggctatggc
tttgtctctttcttcaacaaatgggatgcagagaacgccattcagcagatgggtgggcag
tggttaggaggcagacagattcgaaccaactgggccacaagaaagccccccgccccaaag
accacctatgaaagtaactccaaacacctatcctttgatgaagtagtgaatcagtccagt
cccagtaactgcactgtgtattgtggcggagtcagcacaggactgacagaacaactgatg
agacagactttttctccctttggacaaatcatggaaatccgagttttccccgacaaaggc
tattcatttgtgaggtttaactcccatgagtcagcagcccatgccattgtgtcagtgaat
ggcacctcaatagagggccacatagtcaaatgctactggggaaaagagaccccagacatg
atgaacccgatgcagcagatgcctatgccccagcagaacaagatgagcttccctgcggca
gcacagccctatggccagtggggccagtggtacggtaacgggccccagatcagccagtac
gtgccgaatgggtggcaggtccccacctacaacgtctacggccaagcctggaaccagcag
ggctttaatcacttaccggccagtgctgggtggactggcatgagcgccatcagtaacggt
ggggttatggagcctacacagggattgaatgggagtatgctagccaaccagccgggtatg
ggagccgcaggataccccacacactga
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