Etheostoma cragini (Arkansas darter): 117948476
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Entry
117948476 CDS
T07493
Symbol
slc6a13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117948476 (slc6a13)
Transporters [BR:
ecra02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117948476 (slc6a13)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117948476
NCBI-ProteinID:
XP_034733994
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Position
8:16646021..16663312
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AA seq
620 aa
AA seq
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MKGGTGDMENPSKVEPSNGHNRSLDIVPSNEEKMTDRGQWGNKIEFVLSVAGEIIGLGNV
WRFPYLCYKNGGGAFFIPYLIFLFACGIPVFFLETALGQYTSEGGITCWRKICPLFEGVG
YATQVIVALLNIYYIIVLAWAVFYLSQSFTWDLPWASCNNTWNTDSCMAFQRGNSSINHH
ENTTSPVIEFWERRVLRISSGIDHIGSLNGDLVICLAVAWVICYFCIWKGVKSTGRVVYF
TATFPYAMLVVLLIRGVTLPGASRGIHFYLYPDLGRLSDPQVWMDAGTQIFFSYAICLGC
LTALGSYNKYNNNCYKDCLSLCFLNSGTSFIAGFAIFSILGFMSYEQNVPISEVAESGPG
LAFIAYPRAVSMMPFSPLWACCFFIMIVFLGLDSQFVCVESLVTAMVDMYPATFRRKYRR
ELLILAVAVASFILGLIMLTEGGMYIFQLFDYYAASGVCLLFVAIFETVCIAWIYGADRF
YDNIEDMIGYRPSPVIKYCWLFFTPATCIGTFAFALIKYSPLKYNNEYVYPWWGYGIGWI
LALSSMLCIPLWVAMKLYYTPGTLRERLVLLTTPSTDLPKTKLEQEKLLAIFAADSDSLH
QKSPPTKDGYFPVDEKESHC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggggaacaggggacatggaaaacccgtccaaggtggagccctctaatgggcac
aacaggtccctggacattgtgcccagtaatgaggagaagatgacagacaggggtcagtgg
ggcaacaagattgagtttgttctgtcagtggctggagaaattattggtctggggaatgtc
tggcgtttcccctacctttgttataagaacggaggaggtgccttcttcatcccatacctc
atcttcctgtttgcttgtggcatcccggtcttcttcctggagacagctctgggtcagtac
accagtgaaggaggcatcacctgctggaggaaaatctgccccttgtttgaaggagtgggt
tatgccacccaggtgattgttgctctgcttaacatctactacatcatcgtgttagcctgg
gccgtcttctatttgtctcagtctttcacttgggatctgccctgggcctcctgcaacaac
acctggaacacagattcctgtatggcatttcagagggggaatagctccatcaatcaccat
gagaacaccacctctcctgtcattgagttctgggagcgaagagtgctgagaatttcctca
ggtattgatcacattggctctctgaatggggacctagtcatctgtctggccgtcgcctgg
gtcatctgctacttctgcatctggaagggagtaaagtctactggcagggttgtttacttt
acagcaaccttcccttatgccatgctggtggtcctgctgatcagaggggttaccctgcct
ggagcctccaggggaatccacttctacctctaccccgacctgggacggctgtctgaccca
caggtatggatggatgcagggactcagatcttcttctcctatgccatctgcctgggttgc
ctcacagctctgggaagctacaacaaatacaataacaactgctacaaggattgcctgtcc
ctctgtttcctgaacagtggtaccagttttattgcagggtttgccatcttttccatcctg
ggcttcatgtcctatgagcagaatgtgcccatctctgaagtggctgaatctggtccaggc
ttggcgttcatagcctatcctcgtgctgtgtccatgatgcctttctcccctctatgggct
tgctgcttcttcatcatgatcgtctttctgggactggacagtcaatttgtgtgtgtggag
agcctggtgacagccatggtggacatgtatcctgccaccttccggcgtaaataccgcaga
gaactccttatcctggcagtggctgtggcgtccttcatcctgggactcatcatgctgaca
gagggtggcatgtacatcttccagctctttgactactatgcagcaagtggggtctgcctg
ctcttcgtggctatatttgagactgtttgcatcgcttggatttatggtgctgaccgtttc
tatgacaacatagaggacatgatcggctatcgccccagccctgtcatcaaatattgctgg
cttttcttcactcctgcaacatgcattggaacctttgctttcgccttgatcaagtactca
cctctgaagtacaacaatgaatatgtatatccatggtggggatatgggattggctggata
ctggccctgtcctccatgctgtgtatccctctttgggtagcaatgaaactgtactacacc
cctggaacactgagagagcgccttgttctcttgaccactccttccactgatttaccgaag
accaaactggagcaggagaagctgctggccatcttcgcagcagacagcgacagcctccat
cagaaatcacctcccactaaggacggctacttccctgttgatgaaaaagagtctcattgc
tag
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