Etheostoma cragini (Arkansas darter): 117950074
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Entry
117950074 CDS
T07493
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04810
Regulation of actin cytoskeleton
ecra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117950074 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117950074 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117950074 (cyfip1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117950074 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
117950074 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
117950074
NCBI-ProteinID:
XP_034736660
LinkDB
All DBs
Position
9:complement(23452082..23484841)
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AA seq
1253 aa
AA seq
DB search
MTSTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSIMFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNVMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHIERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYEDKMYLTPNEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDVEYRKLFDLALQGIQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTCEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPPNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPTILDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSANYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFVYYKILAGS
LLLDKRLRADCKNQGANIPWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRISAALYKSL
DLAINRFESEDLTSIMELEGLLDINRMTHKLLSKYLTLDSLDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKTLNLAYSS
IFNTYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQHRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQILNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccacagtgactttagaagatgccctgtccaacgtggacctgctggaggagctg
ccccttccagaccagcagccatgcatcgagcccctcccctcctccatcatgtttcagccc
aacttcaacaccaactttgaggaccgaaatgcgtttgtcaccggcatcgccagatacatt
gagcaggccacggtccactccagcatgaatgtgatgttggaggaggggcaggagtacgcc
atcatgctgtacacctggaggagctgctcgcgtgcgataccacaggtgaaatgcaacgaa
cagcccaacagagtggagatctacgagaagaccgtggaggtcctagagccggaagtcacc
aagctgatgaatttcatgtacttccagcgcacagcaatcgaccgcttctgcggagaagtg
cgtcgtctctgtcacatcgagcgcagaaaagactttgtctcggaggcatacctgctaacc
ctcggaaagttcatcaacatgttcgctgtgctggatgagctgaagaacatgaaatgcagc
gtgaagaacgaccactccgcctacaaacgcgccgcccagttcctcagaaaaatgtctgag
ccttcatcgatccaggagtctcagaacctgtccatgttcctggcaaaccacaacaaaatt
acccagtctctgcagcagcagctggaggtgattaatggatatgaggagctgctggcagat
attgttaacctgtgtgtcgactactacgaggacaagatgtacctcactcccaatgagaaa
cacatgctgctcaaagtgatgggattcggcttgtacctcatggatggaaacagcagcaac
atctacaagctagatgccaagaagagaataaacctgaccaagattgacaagtttttcaag
caactgcaggtggtccctctgtttggcgacatgcagattgagttgtcccggtacatcaag
accagtgctcactttgaggagaacaaatctaggtggacttgcacgtctatatccagcagc
ccccagtacaacatctgcgagcagatgattcagatccgcgaggatcacatgcgcttcatc
tcggagctggctcgctatagcaacagcgaggtggtgactggatcagggcgtcaggaagcc
caaaagactgatgttgagtacaggaagctgtttgacttggccctgcagggcatccagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcctggaaactagttcatccaacc
gacaagtactccaacaaagagtgccctgacaacgctgaggagtacgagagagccaccaga
tacaactacacatgcgaggagaagtttgctctggtggaggtgatggcaatgataaaggga
ctgcaggtgttgatgggacgcatggagagtgtgttcaatcacgccatccgccacaccatc
tactcggctctgcaggactttgctcaggtcactttgcgcgaaccactgcgacaagccatc
aagaagaagaagaatgtcatccagagcgtcctccaggccatccggaagacagtgtgcgac
tgggagacgggccgggagccacccaacgaccctgccctccggggagaaaaagatcccaag
gggggttttgatatcaaggttcctcgccgagcagtggggccctccagtacacagctttac
atggtgaggactatgctggagtctctcattgctgacaaaagtggctctaagaagactctg
cgcagcagtctggatggccccaccatcctggacatggagaagttccaccgcgagtccttc
ttttacacgcatctgctgaacttcagtgagaccttgcagcagtgttgtgacctttcccag
ctctggttcagggagttcttcctggagctcacaatgggccgcaggatccagttccccatc
gagatgtccatgccctggatcctcactgaccacatcctggagaccaaggaagcttccatg
atggagtatgtgctgtatcccctggatttgtacaatgacagcgcaaactacgccctgacc
aaattcaagaagcagttcctctatgacgaaatagaggctgaggtgaacttgtgctttgat
cagtttgtctacaagctggctgatcagatatttgtctactacaagatcctagcaggaagt
cttctgcttgacaaacgtttgagagccgactgcaagaaccaaggggccaacattccctgg
ccgtcttccaaccgctacgaaacactgctgaagcaacgccacgtccagcttctaggccgc
tccattgatcttaacagactcatcacgcagaggatttcagctgccctgtacaagtctctg
gatctggccatcaatcgctttgagagtgaggacctcacctcaataatggaactggaaggt
ctcctggacatcaaccgcatgacacacaagctcctcagtaagtacctgaccctggacagc
ttggacgccatgttccgcgaggccaaccacaacgtgtcggcgccctatggccggataacg
ctgcacgtcttctgggagctcaattatgacttcctgcccaactattgctacaacggctcc
accaacaggtttgtgcgcactgtcctgcctttctctcaggagttccagagggacaagcca
cccaacgctcagccccagtacttgtacgggtcaaagaccttgaatctggcgtacagcagc
attttcaacacctacaggaactttgtgggtcccccgcacattaaggtcatgtgtcgactg
ctgggttaccagggcatcgccgtggtgatggaggaactgctgaaggtggtcaaaagcctg
cttcagggcaccataatgcagtatgtgaagaccctgatggaggtgatgcccaagatctgc
agactgccccgccatgagtatggttccccaggtatcctggaattctttcaccaccagctg
aaggacattgttgagtacgctgagctcaagacggtgtgcttccagaacctgagggaggtg
ggcaacgccatgctgttctgtctgctgagcgagcagagtctgtcacaggaagaagtttgt
gatttgctgcacgctgcaccttttcagaacattcttccaagagtccatgtcaaagagggg
gaacgcctggatgccaagatgaagcgcttggaggccaaatacacagcactgcacctggtt
ccactgatagagcgcctcggaacaccacagcaaattgccattgctcgcgagggcgacctt
ctgaccaaagagcggctgtgttgcggtttgtccatgttcgaggtcatcctcacacgtgtg
cgaggcttcttggacgaccccatctggcgtggcccgctgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagttccaccggctgtggagcgccatgcagtttgtgtactgcatc
cctgtgggagcccatgagttcacagtggagcagtgcttcggagacggcctccactgggct
ggctgcatgatcatctccctcctgggacagcaccggcgctttgacatcctcgacttcagc
taccaccttctcaaggtgcagaaacacgacggcaaggatgaggtcatcaagagcgtgcca
ctgaaaaagatggtcgacagaatccgcaaattccagatcctcaacaatgagatttttgcc
atcttgaacaagtacctcaagtctggagacggagagaacatgccggtcgaacacgtgcga
tgcttccagcccccgatacaccagtcactcgccagcagctga
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